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SCN18_25_1_16_R1_B_scaffold_9240_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: 344..1822

Top 3 Functional Annotations

Value Algorithm Source
RNA-binding protein n=1 Tax=Pusillimonas noertemannii RepID=UPI0002F4A633 similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 479.0
  • Bit_score: 723
  • Evalue 1.40e-205
Transcription accessory protein similarity KEGG
DB: KEGG
  • Identity: 96.3
  • Coverage: 493.0
  • Bit_score: 917
  • Evalue 1.40e-264
Transcription accessory protein {ECO:0000313|EMBL:CDM25016.1}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.3
  • Coverage: 493.0
  • Bit_score: 917
  • Evalue 7.10e-264

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1479
ATGACCATGACCCGCTCCGATTCCCAGACCCATGCCGTCGATCCCGCCCGCGTCCTGCGGCTGCTGACGGCGGAACTCGACGCCCGCCCCGCCCAGGTCGCGGCGGCGGTGGACCTGCTGGACTCCGGCGCCACCGTGCCCTTCATCGCCCGCTACCGCAAGGAAGCCACCGGCGGGCTGGACGACACCGTGCTGCGCCAGCTGGAAGTGCGCCTGCTCTACATCCGCGAGCTGGAAGGCCGCCGCGTGGCGATCCTGGACTCCATCGCCGGACAGGGCAAACTGGATGACGCCCTGCGGGCGCAGATCCTGGAAGCCGACAGCAAGCAGCGGCTGGAGGACCTGTACGCCCCCTACAAGCCGAAGCGGCGCACGCGCGCCCAGATCGCCCGCGAGGCCGGCCTGGAGCCCCTGGCCGACACCCTGCTGGCCGACGCCGGGGCCGACCCCGAGGCCCTCGCGGTCGGCTACCTGAACGCCGAGGCCGGCTTCGAGGACGCGCGCGCCGTCCTGAACGGCGCGCGCGACATCCTGGCCGAGCGCTTCGCGGAAAACGCCACGCTGCTCGACACCCTGCGCACGGAGCTCTGGAACACCGGCCGGATCACCGCCCAGGTCGTGGCGGGCAAGGAAACCGAGGGCGCGAACTTCCGCGACTGGTTCGACTTCAGCGAAAGCCTGCGCACCCTGCCCTCGCACCGCATCCTGGCGCTGCTGCGCGGCCGCCAGCAAGGCACCCTGGACCTGCGCCTGGGGCTGGACCCCGAACGCGAGGCCGAAACCCCGCACCCCTTCGTGGCGCGCGTGGCCGGCATCCTGGACCTGGACGCGCGCTTCGACGCCCGCGCCACCCCCCGCCAGCACTGGCTGGCCGAAGTCTGCCGCTGGACCTGGCGGGTCAAGCTGCTGACCGGCTTCGAGACCGAGCTGATCGGCCGGCTGCGCGAAACGGCCGAGGCCGAGGCCATCCGCGTGTTCGCCGCCAACCTGAAGGACCTGCTGCTGGCCGCGCCCGCCGGCCCGAAGGCCGTGCTGGGCCTGGACCCCGGCATCCGCACGGGCGTCAAGGTCGCCGCCATCGACGCCACCGGCAAGCTGCTGGAGACCGCCACGATCTACCCCTTCGAGCCGCGCCGCGACGTGGAGGGCAGTCTGCGGACCCTGGCCGCCCTGGTCGCGCGCCACCGCATCGGCCTGGTGGCCATCGGCAACGGCACCGCTTCTCGCGAGACCGAACACCTGGTCGCCGCGCTGCGCGAGCGCCACCCCGAACTGGCCTTCGAGCGCGTCGTCGTGTCCGAGGCCGGCGCCTCGGTCTATTCGGCCTCCGAACTGGCGGCCCAGGAATTCCCCGAGCTGGACGTCAGCCTGCGCGGCGCGGTCTCCATCGCTCGCCGCCTGCAGGATCCGCTGGCCGAACTGGTGAAGATCGAGCCCAAGGCCATCGGCGTGGGCCAGTACCAGCACGACGTCAACCAG
PROTEIN sequence
Length: 493
MTMTRSDSQTHAVDPARVLRLLTAELDARPAQVAAAVDLLDSGATVPFIARYRKEATGGLDDTVLRQLEVRLLYIRELEGRRVAILDSIAGQGKLDDALRAQILEADSKQRLEDLYAPYKPKRRTRAQIAREAGLEPLADTLLADAGADPEALAVGYLNAEAGFEDARAVLNGARDILAERFAENATLLDTLRTELWNTGRITAQVVAGKETEGANFRDWFDFSESLRTLPSHRILALLRGRQQGTLDLRLGLDPEREAETPHPFVARVAGILDLDARFDARATPRQHWLAEVCRWTWRVKLLTGFETELIGRLRETAEAEAIRVFAANLKDLLLAAPAGPKAVLGLDPGIRTGVKVAAIDATGKLLETATIYPFEPRRDVEGSLRTLAALVARHRIGLVAIGNGTASRETEHLVAALRERHPELAFERVVVSEAGASVYSASELAAQEFPELDVSLRGAVSIARRLQDPLAELVKIEPKAIGVGQYQHDVNQ