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SCN18_25_1_16_R1_B_scaffold_7814_2

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(242..994)

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase sigma factor FliA n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GQ14_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 69.8
  • Coverage: 245.0
  • Bit_score: 315
  • Evalue 2.60e-83
RNA polymerase sigma factor for flagellar operon similarity KEGG
DB: KEGG
  • Identity: 95.6
  • Coverage: 250.0
  • Bit_score: 468
  • Evalue 8.90e-130
RNA polymerase sigma factor {ECO:0000256|RuleBase:RU000715}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 250.0
  • Bit_score: 468
  • Evalue 4.40e-129

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 753
ATGCCTCTTTCCGAGGACCAGCTGATTGCCCGCCATGCGCCGCTCGTGCGTCGGCAGGCCCTGGCGCTGATCGGCAAGCTGCCGGCCAGCGTCGAACTCGACGACCTGATGCAGGCCGGCATGATGGGGCTGCTGGATGCGGTGCGGCGCTATCGGCAGCAGGCCGACGCGCAATTCGAAACCTATGCGGTCACCCGCATCCGCGGCGCCATGCTGGATGAACTGCGCAGCCAGGACTGGCTGCCGCGCAGCGTGCGCGCCAAGGCGCGCAGCATCGAGGACGCCATCCAGACCCTGCGCCACCGCCTCCTGCGCCCGGCCACCGAGGCCGAGATCGCCGAGGAAATGGGCATGGAACTGGCCGATTACCAGGCGTTGCTCGAAGAAGCGCGCGGCGTCCAGGTGCTGATGTACGAAGACCTGGCCCTGCACCGGGAAGACCACGACGGCGAAGGCGTGCTGGACGCGGTGGCGGGGGGGCAGGGCGGCAATCCCCTGGACTGGCTGATGCGCGAGGGCCTGCGGTCGGTGCTGATCGAGGCGATCCGCAATCTGCCGGAACGCGAGCAGTTGCTGCTGTCGCTGCAGTTCGAGCAGGACCTGAACCAGAAGGAAATCGCCGCCGTCCTGGAAATCACCGAGGGCCGCGTGTCCCAGCTCCGGTCCCAGGCCGTGGCGCGCATCCGGGCTTGGCTGTCCAGCCATTCCTGGGAACCCGACGCCGACGCCGACGACTACGAACATCTCCTGTAG
PROTEIN sequence
Length: 251
MPLSEDQLIARHAPLVRRQALALIGKLPASVELDDLMQAGMMGLLDAVRRYRQQADAQFETYAVTRIRGAMLDELRSQDWLPRSVRAKARSIEDAIQTLRHRLLRPATEAEIAEEMGMELADYQALLEEARGVQVLMYEDLALHREDHDGEGVLDAVAGGQGGNPLDWLMREGLRSVLIEAIRNLPEREQLLLSLQFEQDLNQKEIAAVLEITEGRVSQLRSQAVARIRAWLSSHSWEPDADADDYEHLL*