ggKbase home page

SCN18_25_1_16_R1_B_scaffold_8024_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(1400..2032)

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal large subunit pseudouridine synthase C (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 96.2
  • Coverage: 210.0
  • Bit_score: 411
  • Evalue 1.10e-112
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 96.2
  • Coverage: 210.0
  • Bit_score: 411
  • Evalue 5.40e-112
Pseudouridine synthase n=1 Tax=Pusillimonas sp. (strain T7-7) RepID=F4GXJ9_PUSST similarity UNIREF
DB: UNIREF100
  • Identity: 71.8
  • Coverage: 209.0
  • Bit_score: 304
  • Evalue 5.10e-80

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
GGCGTGGCCGTGCACGGCGGCAGCGGCGTGGCCTTCGGTGTGATCGAACAGTTGCGCGCGGCGCGCCCGGACGAGCGCATGCTGGAACTGGCGCACCGCCTGGACCGGGAAACGTCCGGCGCGCTGATGGTGGCGCGCAGCCGCAAGGCCCTGGTGGCCCTGCACGACATGATGCGCCAGAGCCAGGGGCGCAAGCACTATCTGGCGCTGGTCGTGGGCGACTGGGTCAACGACCGCCAGCACATCCGCCTGCCCCTGCTCAAATACCTGACCCCGGACGGCGAGCGCCGGGTGCGCGTCGACGCCCTGGGCAAGCCCGCCCACACCATCGTCACGCTGCGGCGCCGCTACGCCGGACGCTATTCCCTGGTGGGGGCCGAACTGCGCACCGGGCGCACCCACCAGATCCGGGTGCACCTGGCGGCCCAGGGGCATCCGATCGCCGGCGACGAGAAATACGGGCCGGACGCGATCCGCGCCGCCCTGGCCGCCCAGGGCTTCCGGCGCATGTTCCTGCATGCGCACCGGCTGGAAATCCCCCATCCGGTTTCCGGCGAGCCCCTGGTCTTCGAATCCCCGCTGCCGCCCGCCTGCCGGGCGCTGCTGGATCAACTGGAGCATGCCCGCCCATGA
PROTEIN sequence
Length: 211
GVAVHGGSGVAFGVIEQLRAARPDERMLELAHRLDRETSGALMVARSRKALVALHDMMRQSQGRKHYLALVVGDWVNDRQHIRLPLLKYLTPDGERRVRVDALGKPAHTIVTLRRRYAGRYSLVGAELRTGRTHQIRVHLAAQGHPIAGDEKYGPDAIRAALAAQGFRRMFLHAHRLEIPHPVSGEPLVFESPLPPACRALLDQLEHARP*