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SCN18_25_1_16_R1_B_scaffold_7413_3

Organism: SCN18_25_1_16_R1_B_Burkholderiales_68_8

near complete RP 43 / 55 MC: 2 BSCG 45 / 51 MC: 4 ASCG 10 / 38
Location: comp(1578..2165)

Top 3 Functional Annotations

Value Algorithm Source
tRNA pseudouridine synthase A (EC:4.2.1.70) similarity KEGG
DB: KEGG
  • Identity: 94.1
  • Coverage: 186.0
  • Bit_score: 355
  • Evalue 5.00e-96
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171, ECO:0000313|EMBL:CDM24403.1}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridylate synthase I {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA-uridine isomerase I {ECO:0000256|HAMAP-Rule:MF_00171}; TaxID=1437824 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Castellaniella.;" source="Castellaniella defragrans 65Phen.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 94.1
  • Coverage: 186.0
  • Bit_score: 355
  • Evalue 2.50e-95
tRNA pseudouridine synthase A n=1 Tax=Burkholderia multivorans (strain ATCC 17616 / 249) RepID=TRUA_BURM1 similarity UNIREF
DB: UNIREF100
  • Identity: 68.7
  • Coverage: 163.0
  • Bit_score: 232
  • Evalue 2.30e-58

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Taxonomy

Castellaniella defragrans_SCNPILOT_SOLID2_TRIM150_Castellaniella_66_80 → Castellaniella → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 588
CTGCCGGATACCCTGGCCGTGCAGTGGGCCCGCGCCGTCCCCGACGATTTCCACGCCCGCTTCGACGCCCGCGCCCGCACCTATTTCTACGTGCTGCGCAGCGCTCCGGTGCGTTCCCCCATCCTGCACGGGCGGACCGGCTGGGTGCACGACCGGCTCGACGACGGCGCCATGCGCGCCGCCGCCGCCCTGCTGGTGGGCGAGCACGATTTCAGCGCCTTCCGCTCGTCCGAGTGCCAGGCGGCCAGCCCGGTGCGTACCCTGCAGGCGCTGGAGATCCATCGCGGCGGGGATTTCCTGGTCTTCGAATTCCGCGCCAACGCCTTCCTGCACCACATGGTGCGCAACCTGATGGGCGTGCTGGTGATGGTGGGGCGGGGCCGGCGCCCGCCCGAATGGGCGGCCGAGCTGCTGCGCGAGCGCGACCGGCGGCGGGCCGCGCCCACCTTCATGCCCGACGGCCTGTACCTGGCGCACGCCGATTATCCGGATGCGGACCTGCCGCAGCGCACGGCCCGGGAGGCCCTGCGCCATCACCTGGGGATGCTGGATGCCGCTCCGATTCGTCTGGCATGGGGCAGTCCGTAG
PROTEIN sequence
Length: 196
LPDTLAVQWARAVPDDFHARFDARARTYFYVLRSAPVRSPILHGRTGWVHDRLDDGAMRAAAALLVGEHDFSAFRSSECQAASPVRTLQALEIHRGGDFLVFEFRANAFLHHMVRNLMGVLVMVGRGRRPPEWAAELLRERDRRRAAPTFMPDGLYLAHADYPDADLPQRTAREALRHHLGMLDAAPIRLAWGSP*