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SCN18_25_1_16_R1_B_scaffold_89_17

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(18187..19215)

Top 3 Functional Annotations

Value Algorithm Source
TRAP-type C4-dicarboxylate transport system, periplasmic component n=1 Tax=Burkholderiales bacterium JOSHI_001 RepID=H5WKJ3_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 60.9
  • Coverage: 338.0
  • Bit_score: 428
  • Evalue 3.80e-117
TRAP-type C4-dicarboxylate transport system, periplasmic component {ECO:0000313|EMBL:EHR72460.1}; Flags: Precursor;; TaxID=864051 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium JOSHI_001.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 60.9
  • Coverage: 338.0
  • Bit_score: 428
  • Evalue 5.30e-117
TRAP C4-dicarboxylate transport system permease subunit DctP similarity KEGG
DB: KEGG
  • Identity: 57.4
  • Coverage: 340.0
  • Bit_score: 411
  • Evalue 2.30e-112

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1029
ATGGCCGATATCCTGAAGAAGACCGGCTTGTGCATTGCGCTGGCACTGGCCGGCGCGGCGATCGCCTCGGCGCAGACCGTCACGCTCAAGGTGCACCACTTCCTGCCGTCCGGCTCGAACGCGCACCAGAACCTCATCTCTCCGTGGTGCGACAAGATCGAGAGGGAGTCGGGTGGCGAGCTGAAGTGCCAGATCTACCCGGCGATGCAGCTCGGCGGCACGCCGCCCCAACTGCTCGACCAGGCGCGCGACGGCGTGGCCGACATCGTCTGGTCGGTGCCTACCTATTCGGCCGGCCGCTACGTCAAGACCGAAGTCTTCGAGCTTCCGTTCATGGTCGCGAACGCCAGGCAGGGCTCGCAGGCGCTGTGGGAGTACACGCAGAGGTTCTCGCTCGACGAGTTCAAGGGCGTCAAGCCGATCTTCATGCATACCACCGAGAGCTACGTCCTGCACTCGAACAGGCCGGTCAGGACCATGGCCGACCTGAAGGGGATGAAGATCCGCACCGCCACGCGCATCAGCGCGAAGATGATGGCGGCGCTCGGCGGCACGCCGGTCCAGATGCCGATGCCTCAGGTGCCCGACGCGATCTCGAAGGGGGTCGTCGACGGCGTGCTGGTGCCGTGGGAGGCGATTCCCGCGACCAAGCTGCACGAGATCGTCAAGTACCATCTCGACGCGCCGCCGGGTTCGCCGCGCTTCGTCAGCGCGATCTTCATGTTCGGCATGAATCAGGCGAGGTACGACGGCCTGACGCCGAAGCAGAAGAAAGTGATCGACGACAATTCGGGCCTCGCGGCTTCGGCGTGGGCGGGCGGCGTCTTCGATTCGATCATCGGGCCGTACTCGAAGCTCGCGCGCGACCGCGGCAACACGATCGACGTGATCGGCGCCGAGGAGCTGAAGAAGTGGGAAGCGGCCACCGCGCACATCGACGATGACTGGATCAAGGACGTCTCGGCCAAGGGCGCGGACGGCAGGAAGCTGGCCGCCGAGGCCCGGGCGCTGCTGGAGAAGTACAAGTAG
PROTEIN sequence
Length: 343
MADILKKTGLCIALALAGAAIASAQTVTLKVHHFLPSGSNAHQNLISPWCDKIERESGGELKCQIYPAMQLGGTPPQLLDQARDGVADIVWSVPTYSAGRYVKTEVFELPFMVANARQGSQALWEYTQRFSLDEFKGVKPIFMHTTESYVLHSNRPVRTMADLKGMKIRTATRISAKMMAALGGTPVQMPMPQVPDAISKGVVDGVLVPWEAIPATKLHEIVKYHLDAPPGSPRFVSAIFMFGMNQARYDGLTPKQKKVIDDNSGLAASAWAGGVFDSIIGPYSKLARDRGNTIDVIGAEELKKWEAATAHIDDDWIKDVSAKGADGRKLAAEARALLEKYK*