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SCN18_25_1_16_R1_B_scaffold_433_15

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(14091..15062)

Top 3 Functional Annotations

Value Algorithm Source
MFS transporter n=1 Tax=Variovorax paradoxus RepID=UPI00036D1168 similarity UNIREF
DB: UNIREF100
  • Identity: 46.0
  • Coverage: 322.0
  • Bit_score: 288
  • Evalue 7.50e-75
putative Bug-like extracytoplasmic solute binding receptor, TTT family similarity KEGG
DB: KEGG
  • Identity: 45.7
  • Coverage: 315.0
  • Bit_score: 287
  • Evalue 3.60e-75
Tax=RIFCSPLOWO2_12_FULL_Betaproteobacteria_64_23_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 64.8
  • Coverage: 321.0
  • Bit_score: 423
  • Evalue 2.10e-115

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 972
ATGAAGAGACTGTTGCAACATCTGGGCGCGGTACTGCTGTGCGCCTTCGCTGCCGGCGCAATGGCGCAGCCGGGCTATCCGTCGCGGCCGATCAGGCTCGTCGTGCCCTATGCCCCCGGCGGCACCACCGACATCATGGCGCGAGTGCTGCAGGTGCCGATGCAGGAGGATCTCGGTCAGCCCATCGTCGTGGACAACAAGGCCGGCGCGGGCGGCGCGATCGGGATGAAGGACGCGGCCCATGCGGCGCCCGACGGCTACACGATCGTGTTCATCAACAACGGCCTGGTCGCGACCACCCCGATCCTGCAAAAGGGCGCCGGTTACGATGGATTGCGCGACTTCGCGCCGATCGGGATGGTCTCTTCCTCGCCGATGCTCGTCGTCGTCAACGGCGAGCTGCCGGTCGACGACCTGAAGGGGTTCATCGACTACGCGAAGAAGAATGCCGGCAAGCTCGAGTACGCCAGCGCCGGGCCCGGTTCGTTCGGCCACCTCTCCACCGAGCTGTTCCTGCGCGCTGCCGGGCTGCAGATGGTGCACGTCCCGTACAAGGGACAGGCGCCGACGCTGAATGCGGTGCTCGGCGGCGAGGTGAAGCTGCTCATCACCTCTCCCTCGTCGGCGATGAACAGCCATATCGCCTCGGGCAAGCTGAAATTGCTCGGCGTCGGCACGCCCGCGCGATCGCCGCTGTATCCGGACACGCCGACCGTCTCGACGGTCCTGCCGGGCTACCAGGCGGAGTCGTGGTTCGCGCTGCTCGCTCCCGCCGGCACGCCGCCCGACGTGATCGCGAGGCTGAACAAGTCGCTGAACAAGGCACTGGCGCTGCCGGACCTGCAGCAGCGGCTCAATACCTTCGGGCTGGTCGCGGTGTCCAGCACGCCCGAGCAGCTGCGCGAGCGCAACGTCGCCGAGGTCGAGCGCTGGGGAACGGTGATCCGGGAGGCCGGCATCAAGGCCGAGTGA
PROTEIN sequence
Length: 324
MKRLLQHLGAVLLCAFAAGAMAQPGYPSRPIRLVVPYAPGGTTDIMARVLQVPMQEDLGQPIVVDNKAGAGGAIGMKDAAHAAPDGYTIVFINNGLVATTPILQKGAGYDGLRDFAPIGMVSSSPMLVVVNGELPVDDLKGFIDYAKKNAGKLEYASAGPGSFGHLSTELFLRAAGLQMVHVPYKGQAPTLNAVLGGEVKLLITSPSSAMNSHIASGKLKLLGVGTPARSPLYPDTPTVSTVLPGYQAESWFALLAPAGTPPDVIARLNKSLNKALALPDLQQRLNTFGLVAVSSTPEQLRERNVAEVERWGTVIREAGIKAE*