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SCN18_25_1_16_R1_B_scaffold_351_4

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 2948..4330

Top 3 Functional Annotations

Value Algorithm Source
Sigma54 specific transcriptional regulator, Fis family n=1 Tax=Thermosinus carboxydivorans Nor1 RepID=A1HPJ0_9FIRM similarity UNIREF
DB: UNIREF100
  • Identity: 45.8
  • Coverage: 456.0
  • Bit_score: 385
  • Evalue 4.90e-104
Sigma54 specific transcriptional regulator, Fis family {ECO:0000313|EMBL:EAX47964.1}; TaxID=401526 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Thermosinus.;" source="Thermosinus carboxydivorans Nor1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 45.8
  • Coverage: 456.0
  • Bit_score: 385
  • Evalue 6.90e-104
Fis family PAS modulated sigma-54 specific transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 45.2
  • Coverage: 458.0
  • Bit_score: 384
  • Evalue 4.10e-104

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1383
ATGCCTCTTCAGGATCGAGAGACGGGGTTGCCCAGCAAGGCGACCGATCTGGTCCTCCTGCTCGAGGATATCCTCGACGTGCTTCCGAACTGCCTGATCGCGATCGACAAGGCCGGGCAGATCGTCCACATCAACAACCCCTATTGCGAGCTGCTCGGCCTGCAGAAGAAGGAGATCATCGGCCGCCACGTCACCTCGGTGGTCTCCCCGGAGACCCAGTTGCACCTCGTCGCGCGGGGTGCGCCGCCGACCAGGAACCAGACGCTGGTCGTTCGCGGGCACAAGATGCTGGTCAACCAGGTTCCGATCCGCAACGGCGACGACGTGGTCGGCGCCGTCGGCATCGCCCTCTTCACCGAAGCCGAACAGCTGCTGGCGGTGGCCCGCCGACTCTTCTCGATCGACATCCGGAACCAGGCGCGTCCGTGCGCCTGGCCCTCGAAATACTCGATCGCCGACGTTATCGGCACCAGCGGCGCCATGCAGGGAGTCCGGGAGCGGGCGCTGCGCGCGGCCCGCACGCGCGCGACCGTCCTGATCGCCGGGGAATCGGGAACCGGCAAGGAGCTCGTGGCCCACTCGATCCATTCGGCGTCGAGCCGCGCGCAACGGCCGTTCGTGCACGTCAACTGCGCGGCGATCCCCAAGAGCCTGCTCGAAACCGAGCTGTTCGGCTACGAGGGCGGATCGTTCACCGGCGCGCGGGCCAAGGGTCATCCGGGCAAGTTCGAGCTTGCCAACGGCGGAACGATCTTCCTCGATGAAATCGGCGACATGCCGATCGAGATGCAATCGGCGCTGCTGCGCGTGCTGCAGGAGCGCGAGCTGGTCCGGGTCGGCGGCACGCAACCGCTGCCGGTCGACGTTCGCGTCGTCTGCGCCACGCATCGCGACCTGCACCGCGAGATCGAGCAGGGGCGGTTCCGGCAGGATCTCTTCTATCGCATCAATGTGTTCCGGATCGAGATGCCGCCGCTGCGCGAGCACCTCGAGGACATTCCGATCCTGGCCCGGCACATCCTTTCCGCGCTCTGTACCGATTACGAGCTCGGAGAAGTGACTATTGCTCCCGACGCGATCGAGCACCTGGCGCGATACCGTTGGCCCGGCAATGTACGCGAGCTGCGCAACGTGCTCGAGCATGCCGTCCATCTGCTTGAGGGCAGCGTGCTGAAGAAGCAGCACTTTCCCGCGTTCTCCGATCCCGCTGACCGCCCGCTGCCGGGCCACCGTTCGTTCCAGGAGGCGATCGCGGCCGCCGAACGGGACGCGTTGCGCGATGCGCTCGAACGGACCCGGGGGAACAAGTCGAAGGCAGCCTCGATTCTCGGAATCGATCGCACCTCGCTGTACAAGAAGCTGCGCGCCTACGATCTCATCTAG
PROTEIN sequence
Length: 461
MPLQDRETGLPSKATDLVLLLEDILDVLPNCLIAIDKAGQIVHINNPYCELLGLQKKEIIGRHVTSVVSPETQLHLVARGAPPTRNQTLVVRGHKMLVNQVPIRNGDDVVGAVGIALFTEAEQLLAVARRLFSIDIRNQARPCAWPSKYSIADVIGTSGAMQGVRERALRAARTRATVLIAGESGTGKELVAHSIHSASSRAQRPFVHVNCAAIPKSLLETELFGYEGGSFTGARAKGHPGKFELANGGTIFLDEIGDMPIEMQSALLRVLQERELVRVGGTQPLPVDVRVVCATHRDLHREIEQGRFRQDLFYRINVFRIEMPPLREHLEDIPILARHILSALCTDYELGEVTIAPDAIEHLARYRWPGNVRELRNVLEHAVHLLEGSVLKKQHFPAFSDPADRPLPGHRSFQEAIAAAERDALRDALERTRGNKSKAASILGIDRTSLYKKLRAYDLI*