ggKbase home page

SCN18_25_1_16_R1_B_scaffold_407_27

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(31010..31708)

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport system, ATPase component n=1 Tax=Microvirga sp. WSM3557 RepID=I4YW24_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 68.5
  • Coverage: 232.0
  • Bit_score: 324
  • Evalue 6.80e-86
ABC-type branched-chain amino acid transport system, ATPase component {ECO:0000313|EMBL:EIM28166.1}; TaxID=864069 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Methylobacteriaceae; Microvirga.;" source="Microvirga lotononidis.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.5
  • Coverage: 232.0
  • Bit_score: 324
  • Evalue 9.60e-86
livF; branched-chain amino acid transport system ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 233.0
  • Bit_score: 308
  • Evalue 8.40e-82

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGCTGCGCGTCGAGAGCCTGCAGGCGGCCTACGGACCGGCGCAGGTGCTGTTCGACATGAGCTTCGAGATCGGCGACGGCGAAGTGGTGACGCTGCTCGGGCGCAACGGCATGGGCAAGACCACGACCATCGCCGCCATCATGGGGCTGCTGCCGACGCTCGCCGGCAAGGCCAGCTTCGACGGCGCGCTGCTGACCGGGCAGCCGCCCCATCGCATCGCGCAGCGCGGCCTCGGCCTGGTGCCGGAAGGCCGGCAGGTGTTCCCGACTCTCACGGTGGAGGAGAACCTGGTCGCCACCGCCGCCGCGCGCTTCGGCGCGCCGGCCTGGACCCTCGAGCGCGTCTACCGCCTGTTCCCGCGGCTGCAGGAACGGCGCACCCACATGGGCGACCAGCTCTCGGGCGGCGAGCAGCAGATGCTGGCGATCGGCCGCGCCCTGATGACCAACCCGCGCCTGCTCATCCTGGACGAGGCGACCGAGGGGCTGGCGCCGCGGATTCGCGCCGAGATCTGGGCCTGCCTGGCGCGCCTCAAGGGCGAAGGGCAGGCCATCCTGCTGGTGGACAAGCATTTGCAGGCCATGCTCGGGCTCGCCGACCGCCACGTCGTGGTCGAGAAGGGGCGCACGGTGTGGAGCGGCCGCTCGTCGGAGCTGGCTGCAGACGACGCGATCAGGCAGCGCTACCTGCAGGTGTGA
PROTEIN sequence
Length: 233
MLRVESLQAAYGPAQVLFDMSFEIGDGEVVTLLGRNGMGKTTTIAAIMGLLPTLAGKASFDGALLTGQPPHRIAQRGLGLVPEGRQVFPTLTVEENLVATAAARFGAPAWTLERVYRLFPRLQERRTHMGDQLSGGEQQMLAIGRALMTNPRLLILDEATEGLAPRIRAEIWACLARLKGEGQAILLVDKHLQAMLGLADRHVVVEKGRTVWSGRSSELAADDAIRQRYLQV*