ggKbase home page

SCN18_25_1_16_R1_B_scaffold_407_29

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(32456..33463)

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport system permease protein LivM n=1 Tax=Lutibaculum baratangense AMV1 RepID=V4RLB0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 58.6
  • Coverage: 333.0
  • Bit_score: 379
  • Evalue 2.60e-102
Branched-chain amino acid transport system permease protein LivM {ECO:0000313|EMBL:ESR26841.1}; TaxID=631454 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Rhodobiaceae; Lutibaculum.;" source="Lutibaculum baratangense AMV1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.6
  • Coverage: 333.0
  • Bit_score: 379
  • Evalue 3.60e-102
inner-membrane translocator similarity KEGG
DB: KEGG
  • Identity: 57.0
  • Coverage: 316.0
  • Bit_score: 342
  • Evalue 7.60e-92

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1008
ATGGCGCAGGCGGACCTGATGCGCAGCGGCGCGGTGCGGGCCGCCGCACCGCCGCGCCCGGGTGCAGGCGGGCTGGTCGTGCCGGCGGTCCTCTTCGGTGCGTTCGCGGCCGTGCCCCTGCTCGGCGCCTTCGTCGCCGAGTCGTGGCTGCTCGGCATGGCGACGCGGATGATGATCTTCGCCATCGCCGCGCTCGCCCTCGACCTGCTGGTCGGCTACGGCGGCCTGGTGTCGTTCGGCCACGCTGCCTTCATCGGCATCGGCGCCTACGCCGTCGGCATCCTCGCCGCGCACGGCATCGGCGACGCCCTCGTCGCCCTGCCGGTCGCGCTGGCTGCCTGCGCGCTGTTCGCCTGGCTCACCGGCAGCATCTGCCTGCGCACGCGCGGCGTCTACTTCATCATGATCACGCTCGCCTTCGGCCAGATGGCATTCTTCACCGCGGGCTCGCTCGCGCCCTACGGCGGCGACGACGGGCTGACCCTGCACGCCCGCAACACCGTCGCGGGGCTGCCATGGCTCGACGACGACCGCTTCTTCCATTACTTCGTGCTGGCGTGCCTGGTGGCCACCTGGCTCGCGTGCCGCGCGCTCGTCGCCTCGCGCTTCGGGCGCGTGTTCCGGGGCGTGAAGGAGAACGCCACGCGCGTGGCCATGCTCGGCTTCGAGGTCTATCGCTTCCGGCTGGCGGGCTACGTCATCGCCGGCACGATCGGTGGGCTGTCCGGTTTCCTGCTCGCCAACGCGACGAATTTCGTCAGCCCCGCCTACATGTCGTGGCAGCGCTCGGGCGAGCTGCTGGTCATGATCATCCTCGGCGGCACCGGCACGCTGCAGGGTGCGATCGCCGGCACCACGATCTACCTGCTGGCCGAGGAATGGCTGTCGGGCCTGACCGAGCACTGGAAGATGATCTTCGGTCCCCTGCTGGTGCTGGCGGTGCTGTTCGTGCCGGGCGGCCTGAGCGGCATCGGCGCGGCCCTGCTGCGGCGGGTGCGCCGTGGCTGA
PROTEIN sequence
Length: 336
MAQADLMRSGAVRAAAPPRPGAGGLVVPAVLFGAFAAVPLLGAFVAESWLLGMATRMMIFAIAALALDLLVGYGGLVSFGHAAFIGIGAYAVGILAAHGIGDALVALPVALAACALFAWLTGSICLRTRGVYFIMITLAFGQMAFFTAGSLAPYGGDDGLTLHARNTVAGLPWLDDDRFFHYFVLACLVATWLACRALVASRFGRVFRGVKENATRVAMLGFEVYRFRLAGYVIAGTIGGLSGFLLANATNFVSPAYMSWQRSGELLVMIILGGTGTLQGAIAGTTIYLLAEEWLSGLTEHWKMIFGPLLVLAVLFVPGGLSGIGAALLRRVRRG*