ggKbase home page

SCN18_25_1_16_R1_B_scaffold_411_2

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 778..1164

Top 3 Functional Annotations

Value Algorithm Source
50S ribosomal protein L19 n=2 Tax=Herbaspirillum RepID=D8IPX8_HERSS similarity UNIREF
DB: UNIREF100
  • Identity: 85.8
  • Coverage: 127.0
  • Bit_score: 216
  • Evalue 1.40e-53
rplS; 50S ribosomal protein L19 similarity KEGG
DB: KEGG
  • Identity: 85.8
  • Coverage: 127.0
  • Bit_score: 216
  • Evalue 4.10e-54
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1175306 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. GW103.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 85.8
  • Coverage: 127.0
  • Bit_score: 216
  • Evalue 2.00e-53

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGGATCTGATCCGCCAACTCGAGCAGGAAGAGATTTCCCGCCTCGGCAAGAGCATCCCCGACTTCGCGCCCGGCGACACGGTCATCGTGAACGTGAACGTGGTCGAAGGCACCCGCAAGCGCGTGCAGGCCTACGAAGGGGTGGTCATCGCGCGGCGCAACCGCGGCCTGAACTCCTCGTTCATCGTGCGCAAGATCTCCTCGGGCGAGGGCGTCGAGCGCACCTTCCAGCTCTATTCCCCGCTGATCGCCGGCATCGAGGTGAAGCGCCGCGGCGACGTGCGCCGGGCCAAGCTCTACTACCTGCGCAATCGCTCCGGCAAGTCGGCGCGCATCCGCGAGAAGCTGCCCGGCAAATCGGTGCGCGAAGCCGGCGGCCAGGCGTAG
PROTEIN sequence
Length: 129
MDLIRQLEQEEISRLGKSIPDFAPGDTVIVNVNVVEGTRKRVQAYEGVVIARRNRGLNSSFIVRKISSGEGVERTFQLYSPLIAGIEVKRRGDVRRAKLYYLRNRSGKSARIREKLPGKSVREAGGQA*