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SCN18_25_1_16_R1_B_scaffold_411_9

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(6477..7895)

Top 3 Functional Annotations

Value Algorithm Source
Na+ driven multidrug efflux pump n=1 Tax=Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337) RepID=Q0K927_CUPNH similarity UNIREF
DB: UNIREF100
  • Identity: 50.0
  • Coverage: 452.0
  • Bit_score: 414
  • Evalue 7.80e-113
h16_A2399; Na+ driven multidrug efflux pump similarity KEGG
DB: KEGG
  • Identity: 50.0
  • Coverage: 452.0
  • Bit_score: 414
  • Evalue 2.20e-113
Na+ driven multidrug efflux pump {ECO:0000313|EMBL:CAJ93494.1}; TaxID=381666 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus necator (strain ATCC 17699 / H16 / DSM 428 / Stanier 337); (Ralstonia eutropha).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 50.0
  • Coverage: 452.0
  • Bit_score: 414
  • Evalue 1.10e-112

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1419
GTGAGCGCCGACCGGCCCGCGCCGCGGGCGCCCGCACGCGAGCGCGAGATCCTGGCGCTCGCCTGGCCGGTGTTCATCGGCCAGCTGGCCGTGATGCTCAACGGGGTGATCGACACCGTCATGGCCGGGCACCGCTCGGCCGTCGACATCGCGGCGGTCGGCCTGGGCGCCAGCATCTACATCAGCATCTACATCGGCCTGATGGGTGTGCTGGTGGCCCTGGGCCCCATCGCCGCGCAGCACTACGGCGCGCAGCGCCACGACCAGATCGGGCTCGAGGCGCGCCAGGCGGTGTGGCTGGCCTTCATGCTGGCGGTGCCGGGATGCGCCGCGCTCGCCTGGAGCGATCTGTGGCTGGGCCTGAGCAGCCCGCCGCCGGAAGTGGCGGCGATGGCGCGCGCCTACCTGTGGGCGGTGGCCGCGGGGCTGCCCGCGGCCCTGCTGTTCCGCGTCTTCCAGTCGCTCGCCAACGCCGTCGCGCGGCCCAAGGCGGTGATGCTGATCAACCTCGCCGGCGTGGCGCTGAAGCTGCCGCTGAACGCGCTCTTCATGGACGGCTGGCGTGCCGGCGAGACCGTCGTCGTGCCCGCGATGGGCGGCGCCGGCTGCGGCGTGGCCACGGCGCTCGCCGCCTGGCTGTCGGTGCTGCTGTCGCTCGTCGCCCTGCGCATCGAGCCCCTGTACCGGCGGCTCGGCGTGGTCGGCGGCGGCGCCCTCGGCCGCCCCGACGGCGCGCGGCTGCGCGCGCTGCTCGCGCTCGGGCTGCCGATCGGCGCGAGCTACCTGGTGGAGGTCACCTCGTTCACCTTCATGGCGCTGTTCGTGGCGCGGCTCGGCGCGACGACCGCCGCCGGCCACCAGATCGCCTCCAACCTGGCCGCGCTGGTGTATATGCTGCCGCTGGCGCTGGCCACGGCGACCAGCGTCCTGGTGGCGCAGTCGCTCGGCGCTGCGCGCCCCGCGGAGGCGCGCGCGCGGACCTGGGCGGGGCTGCGCATCGCGCTCGGCTGCGCGCTGGCCACCGGCGGCGTGCTGTGGGTGGCGCGCGAGCCGCTGGCCGGCCTCTACAGCACCGACGCGGCGGTGATCGCCACCGCCGCCCCGCTGGTCGGGCTGGTTGCGCTGTACCAGGTCTTCGATGCGGCGCAGACGATGTGCGCCTTCGTGCTGCGCGCGCACCGCATCACGACCCTGCCGATGCTGGTCTATCTGGCCAGCCTGTGGGGCATCGGGCTGGGCGGCGGATGGTGGCTCGCCTTCGTGGTCGGCGCCCCGGGCAGCCCGTGGGCGGAGGTAGTCGGCGGGCCGCGCGGCCTGTGGATCGCCTCCGGCCTGAGCCTGGTCCTCGCCTCGCTCGGGCTGGCGGCCATCCTCGCGCGCGCATGGCGCGATCAGGGCCTGTTCACACTGCGATCGTAG
PROTEIN sequence
Length: 473
VSADRPAPRAPAREREILALAWPVFIGQLAVMLNGVIDTVMAGHRSAVDIAAVGLGASIYISIYIGLMGVLVALGPIAAQHYGAQRHDQIGLEARQAVWLAFMLAVPGCAALAWSDLWLGLSSPPPEVAAMARAYLWAVAAGLPAALLFRVFQSLANAVARPKAVMLINLAGVALKLPLNALFMDGWRAGETVVVPAMGGAGCGVATALAAWLSVLLSLVALRIEPLYRRLGVVGGGALGRPDGARLRALLALGLPIGASYLVEVTSFTFMALFVARLGATTAAGHQIASNLAALVYMLPLALATATSVLVAQSLGAARPAEARARTWAGLRIALGCALATGGVLWVAREPLAGLYSTDAAVIATAAPLVGLVALYQVFDAAQTMCAFVLRAHRITTLPMLVYLASLWGIGLGGGWWLAFVVGAPGSPWAEVVGGPRGLWIASGLSLVLASLGLAAILARAWRDQGLFTLRS*