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SCN18_25_1_16_R1_B_scaffold_411_12

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(10100..11362)

Top 3 Functional Annotations

Value Algorithm Source
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=398577 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia ambifaria (strain MC40-6).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.0
  • Coverage: 420.0
  • Bit_score: 733
  • Evalue 9.50e-209
Transcription termination factor Rho n=4 Tax=Burkholderia ambifaria RepID=B1YRF1_BURA4 similarity UNIREF
DB: UNIREF100
  • Identity: 86.0
  • Coverage: 420.0
  • Bit_score: 733
  • Evalue 6.70e-209
rho; transcription termination factor Rho similarity KEGG
DB: KEGG
  • Identity: 86.0
  • Coverage: 420.0
  • Bit_score: 733
  • Evalue 1.90e-209

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1263
ATGCACCTGTCCGAACTCAAATCGCTGCACGTCTCGCAGCTGATCGAGATGGCCACCGGCCTGGAAATCGAGAACCCTCAGCGCATGCGCAAGCAGGAGCTGATGTTCGCGATCCTCAAGCGCAAGGCCAAGACCGGCGAGACCATCTTCGGCGACGGCTGCCTGGAGGTGCTGCCCGACGGCTTCGGCTTCCTGCGCTCGCCCGAGACTTCCTACCTGGCGAGCACCGACGACATCTACATCTCGCCGTCGCAGATCCGTCGCTTCAACCTGCACACCGGCGACTCCATCGAGGGCGAGGTGCGCACGCCCAAGGAGGGCGAGCGCTACTTCGCGCTGGTGAAGGTCGACAAGATCAACGGCGAGCCGCCCGAGGCGAGCAAGAACAAGATCCTGTTCGAGAACCTCACGCCGCTGCACCCGAACAAGCCGATGGTGCTCGAGCGCGACATCCGCGCCGAGGAGAACATCACCGGGCGCATCATCGACATGATCGCGCCCATCGGCAAGGGCCAGCGCGGCCTGATCGTGGCGCCGCCCAAGGCCGGCAAGACGGTGCTGATGCAGCACATGGCGCACGCGATCACCGCCAACCACCCCGACGTGGTGCTGATCGTGCTGCTCATCGACGAGCGCCCCGAGGAGGTCACCGAGATGACCCGCTCGGTGCGCGGCGAGGTGGTCGCCTCCACCTTCGACGAACCGGCCACGCGCCACGTGCAGGTGGCCGAGATGGTGATCGAGAAGGCCAAGCGGCTGGTCGAGCACAAGAAGGACGTGGTCATCCTGCTCGACTCGATCACGCGCCTGGCGCGCGCCTACAACACCGTGGTGCCGGCCTCGGGCAAGGTGCTCACCGGCGGCGTCGACGCCAACGCGCTGCAGCGTCCCAAGCGCTTCTTCGGCGCGGCACGCAACATCGAGGAAGGCGGCTCGCTCACCATCATCGCCACCGCGCTCATCGATACCGGCAGCCGCATGGACGAGGTGATCTACGAGGAGTTCAAGGGCACCGGCAACATGGAGCTGCACCTCAATCGCCGGATGATGGAGAAGCGCGTCTACCCGGCGATCGACATCAACCGCTCCGGCACGCGGCGCGAGGAGCTGCTGATCAAGGCCGAGGTGCTGCAGAAGATCTGGATCCTGAGGAAGCTCCTGCACGACATGGACGAGCTGGAGGCGATGGAGTTCCTGCTCGACAAGGTGCGCCAGACCAAGAGCAACCAGGAATTCTTCGAGATGATGCGCCGCGGCAGCTGA
PROTEIN sequence
Length: 421
MHLSELKSLHVSQLIEMATGLEIENPQRMRKQELMFAILKRKAKTGETIFGDGCLEVLPDGFGFLRSPETSYLASTDDIYISPSQIRRFNLHTGDSIEGEVRTPKEGERYFALVKVDKINGEPPEASKNKILFENLTPLHPNKPMVLERDIRAEENITGRIIDMIAPIGKGQRGLIVAPPKAGKTVLMQHMAHAITANHPDVVLIVLLIDERPEEVTEMTRSVRGEVVASTFDEPATRHVQVAEMVIEKAKRLVEHKKDVVILLDSITRLARAYNTVVPASGKVLTGGVDANALQRPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIYEEFKGTGNMELHLNRRMMEKRVYPAIDINRSGTRREELLIKAEVLQKIWILRKLLHDMDELEAMEFLLDKVRQTKSNQEFFEMMRRGS*