ggKbase home page

SCN18_25_1_16_R1_B_scaffold_411_28

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 24820..28038

Top 3 Functional Annotations

Value Algorithm Source
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=709839 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Herbaspirillum.;" source="Herbaspirillum sp. TSA66.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 1075.0
  • Bit_score: 1746
  • Evalue 0.0
carB; carbamoyl-phosphate synthase large subunit (EC:6.3.5.5) similarity KEGG
DB: KEGG
  • Identity: 80.9
  • Coverage: 1076.0
  • Bit_score: 1741
  • Evalue 0.0
Carbamoyl-phosphate synthase large chain n=1 Tax=Ralstonia sp. PBA RepID=I9W5B3_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 79.9
  • Coverage: 1079.0
  • Bit_score: 1743
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 3219
ATGCCCAAGCGTACCGATCTGCACACCATCCTGATCATCGGCGCCGGCCCGATCGTCATCGGCCAGGCCTGCGAGTTCGACTACTCCGGCGCGCAGGCGTGCAAGGCGCTGCGCCAGGAAGGCTTCCGCGTGGTGCTGGTCAACAGCAATCCGGCCACCATCATGACCGACCCGGAGACGGCCGACGTCACCTACATCGAGCCGATCACCTGGCAGGTGCTCGAGCGCATCCTCGAGAAGGAGAAGCCCGACGCCATCCTGCCCACCATGGGCGGGCAGACGGCGCTCAACTGCGCGCTCGACCTGCATCGCCACGGCGTGCTCGAGAAGCACGGCGTGGAGCTGATCGGCGCCTCGCCCGAGGCGATCGACAAGGCCGAGGACCGCCAGAAGTTCAAGGAGGCGATGACCCGCATCGGGCTCGGCTCGGCGCGCTCGGCGATCGCGCACTCGCTCGAGGAGGCGTGGGCGGCGCAGAGGAACATCGGCTTTCCGGTGATCATCCGCCCCAGCTTCACGCTCGGCGGCACCGGCGGCGGCATCGCCTACAACGCCGAGGAGTTCGACGTCATCTGCAAGCGCGGGCTCGAGGCCTCGCCCACCAGCGAGCTGCTGATCGAGGAATCGCTCATCGGCTGGAAGGAATTCGAGATGGAGGTCGTGCGCGATCGCGCCGACAACTGCATCATCGTGTGCTCGATCGAGAACTTCGACCCGATGGGCGTGCACACCGGCGACTCGATCACGGTGGCGCCGGCGCAGACGCTCACCGACCGCGAGTACCAGCTGATGCGCGACGCCTCGATCGCCATCCTGCGCGAGATCGGCGTGGAGACCGGCGGCTCGAACGTGCAGTTCGCGATCAGCCCGCGCGACGGGCGCATGATCGTCATCGAGATGAACCCGCGCGTGTCGCGTTCCTCGGCGCTGGCCTCCAAGGCCACCGGCTTTCCGATCGCCAAGGTCGCCGCCAAGCTGGCGGTGGGCTACACGCTCGACGAGCTGCGCAACGACATCACCGGGGGCGCCACCCCGGCCGCCTTCGAGCCGACCATCGACTACGTGGTCACCAAGATCCCGCGCTTCGCGTTCGAGAAGTTCCCGCTCGCCGACTCGCGCCTGACCACGCAGATGAAGTCGGTCGGCGAGGTGATGGCGATCGGGCGCACCTTCCAGGAGAGCTTCCAGAAGGCGCTGCGCGGGCTCGAGACGGGCATCGACGGCATGGACGAGCGCAGCAGCGATCGCGACGAGATCGCCACCGAGCTCGGCGAGCCGGGCCCGGAGCGCTTCCTGTACCTGGGCGACGCCTTCCGCGTCGGCATGACGGTGGAGGAGATCCACGAGGAGTCGGGCATCGATCCGTGGTTCCTGGCGCAGGTCGAGGAGATCGTCGCCGCCGAGCGCCGGCTCGCCGGCCGGCGCCTCGGCGATCTCTCGAAGGAGGAGCTGCGCTGGCTCAAGGCGCGCGGCTTCTCCGACCGGCGCCTGGCGCGCCTGCTCGACACCAACCCCGACACGGTGCGCGCGCGCCGGCGCGAGCTGGGCGTGCGCCCGGTGTACAAGCGGGTCGACACCTGCGCGGCCGAGTTCGCCACCGGGACGGCCTACATGTACTCCACCTACGAGGACGAGGACGAGGCCGCGCCCACCGACCGCCGCAAGGTGATGGTGCTGGGCGGCGGCCCCAACCGCATCGGCCAGGGCATCGAGTTCGACTACTGCTGCGTGCACGCCGCCTTCGCGCTGCGCGAGGACGGCTACGAGACGATCATGGTCAACTGCAACCCGGAGACCGTCTCGACCGACTACGACACCTCGGACCGCCTCTACTTCGAGCCGCTCACGCTCGAGGACGTGCTCGAGATCGTCGAGGTCGAGAAGCCGATGGGCGTCATCGTGCAGTACGGCGGCCAGACGCCGCTGAAGCTGGCGCTGGCGCTGGAAGCCAACGGGGTGCCGATCGTCGGCACCTCGCCCGAGTCGATCGACATCGCCGAGGACCGCGAGCGCTTCCAGAAGCTGCTGCAGGATCTCGGCCTCAAGCAGCCGCCCAACCGCACCGCGCGCACCGAGGCGCAGGCGCTCGAGCTGGCCGGCCAGATCGGCTATCCGCTGGTGGTGCGGCCGAGCTACGTGTTGGGCGGGCGCGCGATGGAGATCGTGCACGAGCAGCGCGACCTCGAGCGCTACATGCGCGAGGCGGTGAAGGTGTCCGAGGACAGCCCGGTGCTGCTCGATCGCTTCCTCAACGACGCCATCGAGGTCGACGTCGACTGCCTGTCCGACGGCCGCGAGGTGTTCATCGGCGGGGTCATGGAGCACATCGAGCAGGCCGGGGTGCACTCGGGCGACTCGGCGTGCTCGCTGCCGCCGTATTCGCTGTCGCCGGCCAGCGTCGCCGAGCTCAAGCGCCAGACCACGCTGATGGCGCGCGCGCTGAACGTCTGCGGCCTGATGAACGTGCAGTTCGCCATCCAGCGCGACGGTACCGCCGACGGCACGGTCTACGTGCTCGAGGTCAACCCGCGCGCCTCGCGCACCGTGCCCTACGTCTCCAAGGCCACCGGGCTGCAGCTGGCCAAGATCGCCGCGCGCTGCATGGTCGGGCGCGGCCTGTCCGAGCAGGGCGTGACCCGCGAGGTGGTGCCGTCCTACTACGCGGTGAAGGAGGCGGTGTTCCCCTTCATCAAGTTCCCCGGCGTCGACACCATCCTCGGCCCCGAGATGAAGTCCACCGGCGAGGTGATGGGCGTCGGCCTGACCTTCGGCGAGGCCTTCGTGAAGTCGCAGCTCGGCGCCGGCGTGCGCCTGCCCGAGTCGGGCAAAGTGTTCATCTCGGTGAAGAACGCCGACAAGCCCAAGGCGGTCACGGTGGCGCGCGCGCTGCACGAGCTCGGCTTCTCGCTGGTCGCCACCAAGGGGACGGCGGCGGCCATCGCCGCCGCCGGGCTACCGGTGGCGGCGGTGCACAAGGTGCAGGAGGGCCGCCCGCACGTGGTCGACCTGCTCAAGAACGGCGAGGTCTCGCTGGTGGTCAACACGGTGGAGGAGCGCCGCGGCGCGATCGCCGATTCGCGCGCCATCCGTACCACCGCCCTGGCGCAACGCGTCACCTACTTCACCACCATCGCCGGTGCGCTGGCGGCCGTCGAGGGCATGCGCTCGCTCGCGCGCCTCGACGTGTACTCGCTGCAGGCACTGCACGCCGGGCTGTAG
PROTEIN sequence
Length: 1073
MPKRTDLHTILIIGAGPIVIGQACEFDYSGAQACKALRQEGFRVVLVNSNPATIMTDPETADVTYIEPITWQVLERILEKEKPDAILPTMGGQTALNCALDLHRHGVLEKHGVELIGASPEAIDKAEDRQKFKEAMTRIGLGSARSAIAHSLEEAWAAQRNIGFPVIIRPSFTLGGTGGGIAYNAEEFDVICKRGLEASPTSELLIEESLIGWKEFEMEVVRDRADNCIIVCSIENFDPMGVHTGDSITVAPAQTLTDREYQLMRDASIAILREIGVETGGSNVQFAISPRDGRMIVIEMNPRVSRSSALASKATGFPIAKVAAKLAVGYTLDELRNDITGGATPAAFEPTIDYVVTKIPRFAFEKFPLADSRLTTQMKSVGEVMAIGRTFQESFQKALRGLETGIDGMDERSSDRDEIATELGEPGPERFLYLGDAFRVGMTVEEIHEESGIDPWFLAQVEEIVAAERRLAGRRLGDLSKEELRWLKARGFSDRRLARLLDTNPDTVRARRRELGVRPVYKRVDTCAAEFATGTAYMYSTYEDEDEAAPTDRRKVMVLGGGPNRIGQGIEFDYCCVHAAFALREDGYETIMVNCNPETVSTDYDTSDRLYFEPLTLEDVLEIVEVEKPMGVIVQYGGQTPLKLALALEANGVPIVGTSPESIDIAEDRERFQKLLQDLGLKQPPNRTARTEAQALELAGQIGYPLVVRPSYVLGGRAMEIVHEQRDLERYMREAVKVSEDSPVLLDRFLNDAIEVDVDCLSDGREVFIGGVMEHIEQAGVHSGDSACSLPPYSLSPASVAELKRQTTLMARALNVCGLMNVQFAIQRDGTADGTVYVLEVNPRASRTVPYVSKATGLQLAKIAARCMVGRGLSEQGVTREVVPSYYAVKEAVFPFIKFPGVDTILGPEMKSTGEVMGVGLTFGEAFVKSQLGAGVRLPESGKVFISVKNADKPKAVTVARALHELGFSLVATKGTAAAIAAAGLPVAAVHKVQEGRPHVVDLLKNGEVSLVVNTVEERRGAIADSRAIRTTALAQRVTYFTTIAGALAAVEGMRSLARLDVYSLQALHAGL*