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SCN18_25_1_16_R1_B_scaffold_420_5

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(3480..5057)

Top 3 Functional Annotations

Value Algorithm Source
ATPase AAA n=1 Tax=Bordetella sp. FB-8 RepID=UPI0003664C56 similarity UNIREF
DB: UNIREF100
  • Identity: 68.8
  • Coverage: 459.0
  • Bit_score: 607
  • Evalue 9.10e-171
FIG065221: Holliday junction DNA helicase similarity KEGG
DB: KEGG
  • Identity: 67.7
  • Coverage: 462.0
  • Bit_score: 604
  • Evalue 1.70e-170
Recombination factor protein RarA {ECO:0000313|EMBL:KGF31001.1}; TaxID=1401065 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Oligella.;" source="Oligella urethralis DNF00040.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 66.9
  • Coverage: 450.0
  • Bit_score: 595
  • Evalue 5.00e-167

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1578
ATGCCGCGCCCGGCACCGCCTGAACAGCACGACCCGGCCGACCCGCGCCAGGCGGGCGGCGATCTTTTCGGCGCCGAGCTGGCCGCGGCCACTGCGAGCGCTGCGGCCGGAGCGGCCACGACGGGTGCTGCAGCCGAGGCATCCGGCGCGGCGGCCGCGGCCGACGAGGGCGCGCCGCTGGCCGAGCGGCTGCGGCCGCGCACCCTCGACGAGGTCATTGGCCAGGCGCACCTGCTCGGCCCCGGCAAGCCGCTGCGCGTGGCCTTCGAGTCCGGCCGGCCGCACTCGATGATCTTCTGGGGCCCGCCCGGCGTCGGCCAGACGACGCTGGCGCGGCTGATGGCCGATGCCTTCGATGCGCAGTTCATCGCCATCTCGGCCGTGCTCGGCGGCGTCAAGGAGATCCGCGAGGCGGTGGCCGCCGCCCAGCAGGCGCGCCAGCGCGGACGGCGCACGATCCTGTTCGTCGACGAGGTGCACCGCTTCAACAAGGCGCAGCAGGACGCCTTCCTGCCGCACGTCGAGAGCGGGCTGTTCACCTTCATCGGCGCGACCACCGAGAACCCCTCGTTCGAGGTCAACGGCGCGCTGCTCTCGCGTGCGCGCGTCTACGTGCTCGAGCCGCTGTCGCACGACGATCTCGAGCGGCTGTTCGCGCGCGCGCTCGAGCGGGGCGCCGGGCGTCCCGAGGCTGCCGCCGCGCCGGCCGCGGCCACCGCTGCCGGCGCGGCTGGTGCAGCCGGTGCGGCTGGTACTGGCGCCGGTGTCGCCGAAGCGGCCGTCACCTTCGATGCGCCCGCGCGCGAGCGCCTGATCGGCTGGGCCGACGGCGACGCGCGCCGCCTGCTCAATGCCATCGAGATCGTCGTGGCGGCCGCGCGTGCGCAGGGCCGCACGAGCGTCGATGCCGCCTACCTCGAGACGGCGATGTCGCAGAACCTGCGCCGCTTCGACAAGGGCGGCGAGGTCTTCTACGACCAGATCAGCGCCCTGCACAAGGCGGTGCGCGGCTCCGATCCCGACGCCTCGCTCTACTGGCTGGCCCGCATGCTCGACGGAGGTGCCGATGCGCGCTACCTCGCGCGGCGCATCGTGCGCATGGCGAGCGAGGACGTCGGCCTGGCCGATCCGCGCGCGCTCGCCCTCGCGCTGGATGCCGCCGAGGCCTACGAGCGGCTCGGCTCCCCGGAGGGCGAGCTGGCGCTCGCCGAGGCGGTCGTCTACATGGCCTGCGCGGCCAAGTCCAACGCGGTCTACGTGGCCTGGAAACGCGCCGGCGCGTTCGTGCAGGAGCACGGCTCGGCCCCCGTGCCCATGCATCTGCGCAACGCGCCCACCCGCCTCATGAAGGGCCTGGGCTACGGTCGCGGCTACCGCTACGCCCACGACGAGGAGGGCGGCTACGCCGCCGGCGAGCGCTACTTCCCCGAGGGCGTCGAGCCGCAGCGCTTCTACGAGCCGGTCGAGCGGGGGCTGGAAACCCGCATCCGCGAGAAGCTCGCGTGGCAGCGCGAGCGCGACAGTACGCAGGATGACAGCGCGCAGGATCCGCGGGATCCGCAGGAACCGAACGGCTGA
PROTEIN sequence
Length: 526
MPRPAPPEQHDPADPRQAGGDLFGAELAAATASAAAGAATTGAAAEASGAAAAADEGAPLAERLRPRTLDEVIGQAHLLGPGKPLRVAFESGRPHSMIFWGPPGVGQTTLARLMADAFDAQFIAISAVLGGVKEIREAVAAAQQARQRGRRTILFVDEVHRFNKAQQDAFLPHVESGLFTFIGATTENPSFEVNGALLSRARVYVLEPLSHDDLERLFARALERGAGRPEAAAAPAAATAAGAAGAAGAAGTGAGVAEAAVTFDAPARERLIGWADGDARRLLNAIEIVVAAARAQGRTSVDAAYLETAMSQNLRRFDKGGEVFYDQISALHKAVRGSDPDASLYWLARMLDGGADARYLARRIVRMASEDVGLADPRALALALDAAEAYERLGSPEGELALAEAVVYMACAAKSNAVYVAWKRAGAFVQEHGSAPVPMHLRNAPTRLMKGLGYGRGYRYAHDEEGGYAAGERYFPEGVEPQRFYEPVERGLETRIREKLAWQRERDSTQDDSAQDPRDPQEPNG*