ggKbase home page

SCN18_25_1_16_R1_B_scaffold_579_15

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(17937..18956)

Top 3 Functional Annotations

Value Algorithm Source
putative extra-cytoplasmic solute receptor similarity KEGG
DB: KEGG
  • Identity: 41.3
  • Coverage: 322.0
  • Bit_score: 262
  • Evalue 1.30e-67
Uncharacterized protein id=2165428 bin=GWA2_Polynucleobacter_45_21 species=beta proteobacterium CB genus=unknown taxon_order=unknown taxon_class=Betaproteobacteria phylum=Proteobacteria tax=GWA2_Polynucleobacter_45_21 organism_group=Betaproteobacteria similarity UNIREF
DB: UNIREF100
  • Identity: 41.4
  • Coverage: 324.0
  • Bit_score: 262
  • Evalue 3.60e-67
Tax=GWA2_Polynucleobacter_45_21_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 41.4
  • Coverage: 324.0
  • Bit_score: 262
  • Evalue 5.00e-67

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1020
ATGTTCGTCGTGCAAGTCCGGATGGCTGCCTTGCCGCAGAGGCTGACAGCACGCAGGATCCTTTCGTTCTGTCTCTTCTGCATCGCCAGCCTGCTTTTCTTCCCTTCCGCCTTTTCACAAGATTTCCCCAACAAGCCGCTGCGTATCGTCCTTGCCTACGAAACGGGCGGATCGGTCGACTTTCTGGCCCGTACCGTGGCAAACAAGCTGTCCGAGCGCCTTGGCCAGCCCGTGCTGGTAGAAGCCAAGCCGGGGGCCAACGAACGGATCGCATCGCAGCATCTCCTGATGTCGCCAGCAGATGGCTACACCATGCTGCTGGTGGCCGTCCCTCATGCAACCAACCCTGCGCTGTTTGCAAACATTCCCTACGATACAAGGCGCGATTTCCAGCCGTTGATCCACCTGACCAACCTGCCGCCGGTATTGCTGGTGCGCGCCACATCCGACATCAAGACCCTCGACGATCTGGTGAAGAAGGCCAAGGCCGAGCCAGGTACCATCAGCTATGGTTCACCAGGGGTGGCAACGGGCAATCACCTGATGGTCGAGCTGTTCCAATACGTATCCGGCACATCGTTGATTCACGTGCCGCACAAAGGAGTCGCCGCCCTCACCACAGCCGTTGTGGGCGGCCATGTGGATGTCGGCTCGATCACCATGTCGCCATCCATTCTCGGTTACATCACCAGCGGCCGCCTGCGTGCACTCGCCATAGGCCCCAGCGAGCGCGCGGCGGTATTGGCCGATGTGCCGACATTCGCCGAGCAGGGCTACAAGGACGCCGTGGTCGTGACCTGGTTCGGTCTGGTCATGCGTGCCGGCACCCCAGCCGGCATCGTCAACAAGCTGAATCACGAAATCAATGCGGTGCTGGCCATGCCAGACGTACGCGAACGTCTGGCATCTGCCGGCATGAGCGTGGTGGGCGGCAGCTCCGAGCAATTCACCAGGCATATTCATTCCGAGATAGATCGCTGGGGCAAGATCATCAAGGAACGCGGCATCAAGGTCGATTGA
PROTEIN sequence
Length: 340
MFVVQVRMAALPQRLTARRILSFCLFCIASLLFFPSAFSQDFPNKPLRIVLAYETGGSVDFLARTVANKLSERLGQPVLVEAKPGANERIASQHLLMSPADGYTMLLVAVPHATNPALFANIPYDTRRDFQPLIHLTNLPPVLLVRATSDIKTLDDLVKKAKAEPGTISYGSPGVATGNHLMVELFQYVSGTSLIHVPHKGVAALTTAVVGGHVDVGSITMSPSILGYITSGRLRALAIGPSERAAVLADVPTFAEQGYKDAVVVTWFGLVMRAGTPAGIVNKLNHEINAVLAMPDVRERLASAGMSVVGGSSEQFTRHIHSEIDRWGKIIKERGIKVD*