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SCN18_25_1_16_R1_B_scaffold_579_21

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 24410..24967

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, TetR family n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QJX3_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 37.4
  • Coverage: 182.0
  • Bit_score: 134
  • Evalue 8.00e-29
Uncharacterized protein {ECO:0000313|EMBL:KIZ47849.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 42.4
  • Coverage: 177.0
  • Bit_score: 152
  • Evalue 5.20e-34
TetR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 37.4
  • Coverage: 182.0
  • Bit_score: 134
  • Evalue 2.30e-29

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 558
TTGAAGCAGGATTATCTGCTGGGCGTGGTCTACGACCTGATCTCCGAGCACGGCATCGAGTCGCTCACGATGAGGAACGTGGCCGAACGCAGCAATGTGAGCACGGGCACCATCAACTATCATTTCAAGAACAAAGAGAATCTGCTCATCGCCGCGCTCGAGGAGGCATACAGCCTGCCGAAGGATTGGGCCAACTACAAAGGCTCCTCCGAAGCGCAGCTTCGAAGAATCGCCAATTCCTACATCCTGCGCGCCAAGAGCGACCGCTGGTGGTTCTTCTGGATCAATTATCTTGCCTACAGCACGCGCCATCCCAAGATGCAGATCCGCCAAAGCGAGCGGTACGACAAGCAGCTTCGCTTCTGGGCGCAGCTCATCACGGATGGCCAGGAGAAAGGCGAGTTTCGCACCGATCTCGATCCGGTCGAGACCGCGCGGCGACTGCTCACGACGGTCCATGGCCTCCTGACGTTGCAGCTCATGAAGAGCGACGCCGAAATCCGCGTATACGCTCGCGAGCAGATCAGCAGCGCCATCGATGCGCTCGTCTCCCGTTAG
PROTEIN sequence
Length: 186
LKQDYLLGVVYDLISEHGIESLTMRNVAERSNVSTGTINYHFKNKENLLIAALEEAYSLPKDWANYKGSSEAQLRRIANSYILRAKSDRWWFFWINYLAYSTRHPKMQIRQSERYDKQLRFWAQLITDGQEKGEFRTDLDPVETARRLLTTVHGLLTLQLMKSDAEIRVYAREQISSAIDALVSR*