ggKbase home page

SCN18_25_1_16_R1_B_scaffold_699_22

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 18288..19595

Top 3 Functional Annotations

Value Algorithm Source
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein n=1 Tax=Hydrogenophaga sp. PBC RepID=I4MKG2_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 70.4
  • Coverage: 432.0
  • Bit_score: 606
  • Evalue 1.70e-170
C4-dicarboxylate TRAP-T family tripartite ATP-independent periplasmic transporter, membrane protein {ECO:0000313|EMBL:EIK89702.1}; TaxID=795665 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Hydrogenophaga.;" source="Hydrogenophaga sp. PBC.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 70.4
  • Coverage: 432.0
  • Bit_score: 606
  • Evalue 2.40e-170
TRAP-type C4-dicarboxylate transport system, large permease component similarity KEGG
DB: KEGG
  • Identity: 44.8
  • Coverage: 422.0
  • Bit_score: 375
  • Evalue 1.00e-101

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1308
ATGCTGCAGCAGCTCCTGCCCTTCTGCATCCTGATGGGGGCGTTCCTGGCGCTGCTGGCGCTGGGGGTGCCGGTGTTCTTCGCGATGGGGCTGGCGTCGCTGTCGTTCATCCTGGCGATGGGCGGGCAGGTGCCGTTCAACGTCCTGGCCTCGACGCTGATCCAGGGCATCGACTCGTTCGCCTTCCTGGCGATCCCCTTCTTCTTCCTTGCCGGCGAGCTGATGAACACCGGCGGCATCACGCGGCGGCTGCTCGCCTTCGCCGCGGCGCTGGTCGGCCACATTCGCGGCGGGCTGTCGCATGTCGCGATCATCGCGAGCATGGTGTTCTCCGGAGTGTCCGGCTCGGCCGTCGCCGATGCGTCGGCGATCGGCGGCGCGCTGATCCCGGCGATGAAGGCCCAGAAGTATCCGGCCGAGTACGCGGCCGCGGTGGTCGCGGCGGCCTCCACGATGGGGCCGGTGATCCCGCCGTCGATCGCCTTCGTGGTCTACGCGCTGGTCACCGAGACCTCGGTGGGCGAGCTGTTCCTCGCCGGCGCGATCCCCGGCGTGCTGATGGGCGTGTGGCTGCTGGCGGCCGCGAGCGTGATCGCGCGGCGCCGCGATTTCCCGTTCTCCCCGCGGGCCACCATCGCACGCGTGTTCTCCACGCTGCGCGATGCGATCTTCGCGCTGATGATGCCGGTGATCATCCTCGGCGGCATCGTCGCCGGCGTGGTGACGCCGACCGAGGCCGGCGTGATCGCGGTCGTCTATGCCGCCGTGGTCGGGCTGTTCGTGTATCGGGAAATGCGGCTGGCGGACCTGTGGCGGGTGGTGTGCGAATCGACGATCAGCTCGGGGCTGATCCTGCTGATGGTCGCGGCTTCGGGCACGTTCTCGTGGCTGGTCGCCAACATGGCGATCGGCGACACGCTGGTGACGTTCTTCACCTCGCTCACCGACAGCCGCTGGGTGATGCTGATGGTCATCAACGTCTTCTTCCTGATCTGGGGGCTGGCGCTCGAGCCGCCGGTGGCGCTGGTCACCATGGTGCCGCTGCTGGTGCCGCTGGCCAACGCCTACCACATCGATCTCATCCACCTCGGGGTGGTGGTCGTGCTCAACCTGATGATCGGGCAGCTGACGCCGCCCTCCGGCGTGGTCACCTTCCTGACGGCGCAGATCGCCGGCGCGCCGCTCGCGGCGGTCTTCCGCGAGGCGACGCCGTTCATGCTCGCGCTGATCGTGCTGCTGCTGCTGATCACCTACGTGCCGGCCATCGCGTTGTGGCTGCCCGCCCTGTTGATGGGCGGCCACGGTTGA
PROTEIN sequence
Length: 436
MLQQLLPFCILMGAFLALLALGVPVFFAMGLASLSFILAMGGQVPFNVLASTLIQGIDSFAFLAIPFFFLAGELMNTGGITRRLLAFAAALVGHIRGGLSHVAIIASMVFSGVSGSAVADASAIGGALIPAMKAQKYPAEYAAAVVAAASTMGPVIPPSIAFVVYALVTETSVGELFLAGAIPGVLMGVWLLAAASVIARRRDFPFSPRATIARVFSTLRDAIFALMMPVIILGGIVAGVVTPTEAGVIAVVYAAVVGLFVYREMRLADLWRVVCESTISSGLILLMVAASGTFSWLVANMAIGDTLVTFFTSLTDSRWVMLMVINVFFLIWGLALEPPVALVTMVPLLVPLANAYHIDLIHLGVVVVLNLMIGQLTPPSGVVTFLTAQIAGAPLAAVFREATPFMLALIVLLLLITYVPAIALWLPALLMGGHG*