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SCN18_25_1_16_R1_B_scaffold_861_7

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(8627..12748)

Top 3 Functional Annotations

View all annotations
Value Algorithm Source
DNA-directed RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Short=RNAP subunit beta {ECO:0000256|HAMAP-Rule:MF_01321};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_01321};; RNA polymerase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; Transcriptase subunit beta {ECO:0000256|HAMAP-Rule:MF_01321}; TaxID=887898 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Lautropia.;" source="Lautropia mirabilis ATCC 51599.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 83.8
  • Coverage: 1368.0
  • Bit_score: 2311
  • Evalue 0.0
DNA-directed RNA polymerase subunit beta n=1 Tax=Lautropia mirabilis ATCC 51599 RepID=E7RZ07_9BURK similarity UNIREF
DB: UNIREF100
  • Identity: 83.8
  • Coverage: 1368.0
  • Bit_score: 2311
  • Evalue 0.0
rpoB; DNA-directed RNA polymerase subunit beta similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 1369.0
  • Bit_score: 2306
  • Evalue 0.0

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 4122
ATGGCCAACGCTTCCCACTACTCGTTCACCGAGAAAAAGCGCATCCGCAAGAGCTTCGCCAAGCGGCGCGTGGTGCTCGACGTGCCCTACCTGCTGACCACCCAGATCGAATCGTACGAGCACTTCCTGCAGTCCGGCGTGCCGGCCGAGGCGCGCCGGCCCGACGGGCTGCAGGCCGCCTTCAACTCGATCTTCCCGATCGTCTCGCACAACGAGTTCGCGCGCCTGGAGTTCGTCAACTACTCGCTGGGCAACCCCGCCTTCGACGTCAAGGAATGCCAGCAGCGCGGCCTCACCTTCTGCGCGCCGCTGCGCGCCCGCGTGCGCCTGGTCATCATGGACCGCGAGGCGGCCAAGCCGACCGTCAAGGAGGTCAAGGAGCAGGAGGTCTACATGGGCGAGATCCCGCTCATGACGACCACGGGTTCCTTCATCGTCAACGGCACCGAGCGCGTCATCGTCTCGCAGCTGCACCGCTCGCCGGGCGTGTTCTTCGAGCACGACCGCGGCAAGACCCACAGCTCGGGCAAGCTGCTGTTCTCGGCGCGCATCATCCCCTACCGCGGCTCCTGGCTCGACTTCGAGTTCGATCCCAAGGATGTCCTGTACTTCCGCGTCGATCGCCGCCGCAAGATGCCGGTGACGATCCTGCTCAAGTCCATCGGCCTGACGCCCGAGCAGATCCTCGCGCACTTCTTCGTGTTCGACAGCTTCCGCCTGATGGGCGAAGGCGCGCAGCTCGAGCTGGTGCCCGAGCGCATGCGCGGCGAGATCGCCCGCTTCGACATCGCCGACAAGGACGGCAAGGTCATCGTCGCCAAGGACAAGCGCATCAACGCCCGCCACATCCGCGACATGGACGCGGCCGGCCTCAAGCACGTGTCGGTGCCGGAAGACTACATCCTCGGGCGCACGCTGGCGCACAACGTCGTCGACGCCGAAACCGGCGAGATCGTCGCCAAGGCCAACGACGAGCTCACCGAGGAGGTTCTGAAGAAGCTGCGCCTGGCGGGCATCAAGGAGATCCGCGCGCTCTACACCAACGACCTCGACCAGGGTCCCTACATCTCGCAGACCCTGCGCATCGACGAGACCGCCGACCAGACCGCCGCGCGCATCGCCATCTACCGCATGATGCGTCCCGGCGAGCCGCCCACCGAGGACGCGGTCGAGGCGCTGTTCAACCGGCTCTTCTACAGCGAGGACGCCTACGACCTGTCCAAGGTCGGACGCATGAAGTTCAACCGCCGCGTCGGGCGCGAGGAGCTCACCGGCACGATGACGCTCACCAACGAGGACATCCTCGCCGTCATCAAGATCCTGGTCGACCTGCGCAACGGCAAGGGTGAGATCGACGACATCGATCACCTCGGCAACCGCCGCGTGCGCTGCGTCGGCGAGCTGGCCGAGAACCAGTTCCGCGCCGGCCTGGTGCGCGTCGAGCGCGCGGTCAAGGAGCGCCTCGGCCAGGCCGAGACCGAGAACCTGATGCCGCACGACCTGATCAACAGCAAGCCGATCAGCGCCGCCATCCGCGAGTTCTTCGGCTCGTCGCAGCTGTCGCAGTTCATGGACCAGACCAACCCGCTGTCGGAGATCACGCACAAGCGGCGCGTCTCGGCGCTGGGCCCGGGCGGCCTGACGCGCGAGCGCGCCGGCTTCGAGGTGCGCGACGTGCACCCCACGCACTACGGCCGGGTGTGCCCGATCGAGACGCCGGAAGGCCCGAACATCGGCCTGATCAACTCGCTGTCGCTGTACGCGCAGCTGAACGAGTACGGCTTCCTCGAGACGCCCTACCGCAAGGTGGTCGACCATCGCGTCACCGACGAGATCCACTACCTGTCGGCGATCGAGGAGGGCCGCTACGTCATCGCGCAGGCCAACGCCGCGGTCGACGACGACAACCGCCTCACCGGCGACCTGGTCTCGGTGCGCAAGGCCGGCGAATCCGAGCTGACCTCGCCCGAGCACGTCGAGTACATGGACGTGGCGCCCTCGCAGATCGTGTCGGTGGCCGCCTCGCTGATCCCCTTCCTCGAGCACGACGACGCCAACCGCGCGTTGATGGGCTCGAACATGCAGCGCCAGGCGGTGCCCTGCCTGCGTCCGGAGAAGCCGGTGGTCGGCACCGGCATCGAGCGCACCTGCGCGGTCGACTCGGGCACGGTGGTCACCGCGCTGCGCGGCGGGGCGGTCGACTACGTCGACGCCGACCGCATCGTGGTGCGGGTGAACGACGCCGAGGCCGCGGCCGGCGAGGTCGGCGTCGACATCTACAACCTCATCAAGTACACGCGCAGCAACCAGAATACCAACATCAACCAGCGCCCGATCGTCAAGAAGGGCGACGTGATCGCCAAGGGCGACGTGATCGCCGACGGCGCGTCCACCGACCTCGGCGAGCTCGCGCTCGGCCAGAACATGCTGGTCGCGTTCATGCCGTGGAACGGCTACAACTTCGAGGATTCCATCCTCATCTCCGAGAAGGTGGTCGCCGACGACCGCTACACCTCGATCCACATCGAGGAGCTCTCGGTGCTGGCGCGCGACACCAAGCTCGGCCCCGAGGACATCACGCGCGACATCTCCAACCTGTCCGAGTCGCAGCTCGGCCGGCTGGACGACTCGGGCATCGTCTACATCGGCGCCGAGGTGCAGGCCGGCGACACGCTGGTCGGCAAGGTCACGCCGAAGGGCGAGACCCAGCTCACGCCCGAGGAGAAGCTGCTGCGCGCGATCTTCGGCGAGAAGGCCTCCGACGTGAAGGACACCTCGCTGCGCGTGCCCTCGGGCATGAGCGGCACCGTCATCGACGTGCAGGTGTTCACCCGCGAGGGCATCCAGCGCGACAAGCGCGCGCAGTCGATCATCGACGACGAGCTCAAGCGCTACCGCCTCGACCTCAACGACCAGCTGCGCATCGTCGAGAACGACGCGTTCTCGCGCATCGAGCGGCTGCTGGTCGGCAAGACCGTCAACGGCGGGCCGAAGAAGCTGCCCAAGGGCGCGACGGTTACCGCCGAGTACCTCGCCGACCTCGATCGCTACCACTGGTTCGAGGTGCGCCTGGCCGACGAGGCGGCCGCCAACCAGCTCGAGGCGCTCAAGGAGTCCATCGAGCAGAAGCGCCACCAGTTCGACCTCGCCTTCGAGGAGAAGCGCAAGAAGCTCACCCAGGGCGACGAGCTGCCCCCGGGCGTGCTCAAGATGGTCAAGGTCTACCTGGCCGTCAAGCGGCGCCTGCAGCCGGGCGACAAGATGGCCGGCCGCCACGGCAACAAGGGCGTGGTGTCGCGCATCGTGCCGGTCGAGGACATGCCCTGCATGGCCGACGGCACGCCGGTCGACATCGTGCTCAACCCGCTCGGCGTGCCGTCGCGGATGAACGTCGGGCAGATCCTCGAGACGCACCTCGGCTGGGCCGCCAAGGGCATCGGCCAGCGCATCGGCGAGATGCTCCGGCGCCAGGCCAGGGCGGCCGACCTGCGCAAGCTGTTCGACCAGATCTACGACGGCAACGGCCAGGGCGCCGAGATCGCCCAGCTCGACGACGAGGAGCTCCTCGAGCTGGCCGGCAACCTGCGCAACGGCGTGCCGTTCGCCACGCCGGTGTTCGACGGCGCATCGGAGTCCGAGATCCGGCGCATGCTCGAGATCGCCTATCCCGCCGACGAGGAGCGCACCAAGCTGATCGGCTTCACGCCGAGCAAGACCCAGGTCACGCTGTACGACGGCCGCACCGGCGACGCTTTCGACCGTCCGGTCACGGTGGGCTACATGCACATGCTGAAGCTGCATCACCTGGTCGACGACAAGATGCACGCGCGTTCGACCGGGCCGTACTCGCTGGTCACCCAGCAGCCGCTGGGCGGCAAGGCGCAGTTCGGCGGCCAGCGCTTCGGCGAGATGGAAGTCTGGGCCCTCGAGGCCTACGGCGCCTCGTACATGCTGCAGGAGATGCTCACCGTCAAGTCCGACGACGTGAACGGGCGCACCAAGGTCTACGAGAACCTGGTCAAGGGCGAGCACACCATCGACGCCGGCATGCCCGAGTCGTTCAACGTGCTGGTCAAGGAGATCCGTTCGCTCGGCATCGACATCGACCTCGAGCGCAACTGA
PROTEIN sequence
Length: 1374
MANASHYSFTEKKRIRKSFAKRRVVLDVPYLLTTQIESYEHFLQSGVPAEARRPDGLQAAFNSIFPIVSHNEFARLEFVNYSLGNPAFDVKECQQRGLTFCAPLRARVRLVIMDREAAKPTVKEVKEQEVYMGEIPLMTTTGSFIVNGTERVIVSQLHRSPGVFFEHDRGKTHSSGKLLFSARIIPYRGSWLDFEFDPKDVLYFRVDRRRKMPVTILLKSIGLTPEQILAHFFVFDSFRLMGEGAQLELVPERMRGEIARFDIADKDGKVIVAKDKRINARHIRDMDAAGLKHVSVPEDYILGRTLAHNVVDAETGEIVAKANDELTEEVLKKLRLAGIKEIRALYTNDLDQGPYISQTLRIDETADQTAARIAIYRMMRPGEPPTEDAVEALFNRLFYSEDAYDLSKVGRMKFNRRVGREELTGTMTLTNEDILAVIKILVDLRNGKGEIDDIDHLGNRRVRCVGELAENQFRAGLVRVERAVKERLGQAETENLMPHDLINSKPISAAIREFFGSSQLSQFMDQTNPLSEITHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLSLYAQLNEYGFLETPYRKVVDHRVTDEIHYLSAIEEGRYVIAQANAAVDDDNRLTGDLVSVRKAGESELTSPEHVEYMDVAPSQIVSVAASLIPFLEHDDANRALMGSNMQRQAVPCLRPEKPVVGTGIERTCAVDSGTVVTALRGGAVDYVDADRIVVRVNDAEAAAGEVGVDIYNLIKYTRSNQNTNINQRPIVKKGDVIAKGDVIADGASTDLGELALGQNMLVAFMPWNGYNFEDSILISEKVVADDRYTSIHIEELSVLARDTKLGPEDITRDISNLSESQLGRLDDSGIVYIGAEVQAGDTLVGKVTPKGETQLTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGIQRDKRAQSIIDDELKRYRLDLNDQLRIVENDAFSRIERLLVGKTVNGGPKKLPKGATVTAEYLADLDRYHWFEVRLADEAAANQLEALKESIEQKRHQFDLAFEEKRKKLTQGDELPPGVLKMVKVYLAVKRRLQPGDKMAGRHGNKGVVSRIVPVEDMPCMADGTPVDIVLNPLGVPSRMNVGQILETHLGWAAKGIGQRIGEMLRRQARAADLRKLFDQIYDGNGQGAEIAQLDDEELLELAGNLRNGVPFATPVFDGASESEIRRMLEIAYPADEERTKLIGFTPSKTQVTLYDGRTGDAFDRPVTVGYMHMLKLHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYMLQEMLTVKSDDVNGRTKVYENLVKGEHTIDAGMPESFNVLVKEIRSLGIDIDLERN*