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SCN18_25_1_16_R1_B_scaffold_1083_17

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: 12178..12744

Top 3 Functional Annotations

Value Algorithm Source
Type-F conjugative transfer system pilin assembly protein TrbC n=1 Tax=Delftia sp. (strain Cs1-4) RepID=F6AP95_DELSC similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 200.0
  • Bit_score: 121
  • Evalue 7.10e-25
Type-F conjugative transfer system pilin assembly protein TrbC {ECO:0000313|EMBL:KIN88738.1}; TaxID=1572758 species="Bacteria; Proteobacteria; Betaproteobacteria; Rhodocyclales; Rhodocyclaceae; Thauera.;" source="Thauera sp. SWB20.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 41.0
  • Coverage: 200.0
  • Bit_score: 123
  • Evalue 2.60e-25
type-F conjugative transfer system pilin assembly protein TrbC similarity KEGG
DB: KEGG
  • Identity: 41.5
  • Coverage: 200.0
  • Bit_score: 121
  • Evalue 2.00e-25

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Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
GTGCCGGCGCGTACTGAGATCCGCGCCGTCGCCGCGGTTGCCTGCGCGTTCGGCCTGCTCGGCGCCGGCATCGCGCTCGCCCAGGCGCCGCGCTGGCCCGATGCCGACGACATCGAGCGGGCACGGAAAGCCCACCCCTTCCCGCAAGCCGATCGTCTCGGTGCTCAACCGGTGCCCGCTCCGCCGCGCGTGAACCTGCCGTCGACTGCGGCACCCACCGACATCGAAGCGCTCGCCCGGGCTGGCGCACGTCTCGGCAGCCCCGGCGCGCAGACCACGGCCGCGAGCCCGCTTCGCATCTTCATCACCCTGGAGATGCCCCGCGCGAGCCTTCAGCTGCTGACCGATCAGGCCGCGCGCAGCGGCGCGGTCCTGGTGCTGCGGGGCCTGAAGGCGAACTCGATGCGCGAGACCCTCGCAGCCGTCTCCAGCCTGATCGGCGAGCGTCAGGTGGCCTGGGTGATCGACCCCGAAGCCTTCGCACGCCATCGCATCGAACGCGCGCCGACCTTCGTTCTGAGTCTCGACGATCGCGCCGACACGGCGACCAGCTGCGGCACGGACTGA
PROTEIN sequence
Length: 189
VPARTEIRAVAAVACAFGLLGAGIALAQAPRWPDADDIERARKAHPFPQADRLGAQPVPAPPRVNLPSTAAPTDIEALARAGARLGSPGAQTTAASPLRIFITLEMPRASLQLLTDQAARSGAVLVLRGLKANSMRETLAAVSSLIGERQVAWVIDPEAFARHRIERAPTFVLSLDDRADTATSCGTD*