ggKbase home page

SCN18_25_1_16_R1_B_scaffold_1109_8

Organism: SCN18_25_1_16_R1_B_SCNPILOT_EXPT_750_BF_Burkholderiales_68_35_70_17

near complete RP 47 / 55 MC: 1 BSCG 51 / 51 ASCG 14 / 38 MC: 1
Location: comp(5680..7254)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family protein n=1 Tax=alpha proteobacterium BAL199 RepID=A8TWE1_9PROT similarity UNIREF
DB: UNIREF100
  • Identity: 53.3
  • Coverage: 525.0
  • Bit_score: 528
  • Evalue 4.10e-147
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 43.8
  • Coverage: 530.0
  • Bit_score: 398
  • Evalue 1.80e-108
Tax=RIFCSPLOWO2_02_FULL_Burkholderiales_57_36_curated similarity UNIPROT
DB: UniProtKB
  • Identity: 57.3
  • Coverage: 524.0
  • Bit_score: 594
  • Evalue 1.10e-166

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → SCNPILOT_EXPT_750_BF_Burkholderiales_68_35 → Burkholderiales → Betaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1575
GTGCGACGTTCACTGATCGGACCGACCTTGCGCGAGCGCCGGCGTGCGCTCGGCATCACGCAGTCGAAGCTGGCCGCCGAGGTAGGCATCTCGGCGTCGTACCTGAACCTGATCGAGGGCGACAAGCGCAACATCGGCGGCGTGCTGCTCAAGCGCATCGCCGACGCGCTCGGGCTGGCGCTCGACGAGCTCGACGGCGCCGCCGAGCGGCGGCTGGTGGACGATCTCGGCGAGCTCGCCGGCGAGCCGCTGCTGGCCGACCTACGCCTGGACCCGGCCGTCACCCACGGCCTGGCGAGCCGCCACCGGAACTGGGCGCGCGCACTGATCCGCCTGCATCGCGCCTGGCTCGATCGCGGCGAGGCGGTGGGTGCGCTGTCGGACCGGCTCAACCAGGATCCCTTCCTCGGCGACGCCGTGCACAGCATGCTCAGCCAGGTGGCGGCGATCCGCTCCTCCTCGGAGATCCTGGAGACCGTGGACGACCTCGAGCCGGCGCAGCGCCAGCGCTTCGTGTCCATCGTCAGCGACGAGAGCGCCCGCCTCACCGACGTGGCGCAGGCGCTGGCGGCGTTCTTCGACAAGGCGTACACGGGCACGCGATCGGTCACCCCGGTCGACGAGGTCGACGACTTCATCTTCGATCGCGACAACTACTTCCCGGAGCTCGAGCAGGCGGCGACGGACTTCCGCGCCGCCGCGGCGATCGAGGGCGACTGCCGCGAAGCGGCGCTGGTGGACTACCTGCGGAATACGCACGGGGTGCAGGTGATCGCCCGGCCCTCGACCGAGCTCGATCCCACCGACGTGCGCCACCATGCGGCGTTCGACACCGGCACGCGTACGATGGTGCTGGCCGAGGCGGCCCCGCGCCCGACGCGGCGATTCCAGCTCGCCCGGCTCGCCACCGAGCTCTTCCACCAGGGGCGCGCGATCGACGGCGTGCTCGCGCGGGCCGGCCAGCTCACCACCGACGCCGCGCGCCGGCGCGCACGCCGCGCGCTCTCGTCCTACCTCGCGGCCGCGGTGCTGCTGCCCTACGAGGCCTTCCTCGAGGCCGCCCTGCGCTCGCGCTACGACATCGACTACCTCGCCCAGCGCTTCGGCGCGAGCTTCGAGCAGGTGTGCCACCGGGTGGTCGCGCTGCGCCGGCCGGGCGCGGCCGGCGTCCCCTTCGGGCTGATGCGCACCGATGCCGCCGGCTTCACCAGCAAGCGCTTCCCGCTGCCGCGGCTGGCCCTGCCGCGCCACGGCCCGGCCTGCCCGATGTGGGCGATCTACCAGGCGTTCCACGTGCCCGGCACGGTGGTGCGCCAGCTCGCCGAGTTCCCGACCGGCGACCGGCTGCTGCTGATCGCGCGCACCGTGGAGAAGACGCGCCCGGCCTTCACCCTGCCGCGCCGCTTCCTGTCGATCATGCTCGCCTGCGACGCGCTGTACGCCGACCAGACCGTCTATGGCGACGGCCTCGACCTGTCATCCTCGGCGCCGGCCGTGCCGGTGGGGCCGAACTGCCGGCTGTGCGTGCGCCGCGACTGCCTGTACCGCGAAGAGGATCCGATCATCGATGCCTGA
PROTEIN sequence
Length: 525
VRRSLIGPTLRERRRALGITQSKLAAEVGISASYLNLIEGDKRNIGGVLLKRIADALGLALDELDGAAERRLVDDLGELAGEPLLADLRLDPAVTHGLASRHRNWARALIRLHRAWLDRGEAVGALSDRLNQDPFLGDAVHSMLSQVAAIRSSSEILETVDDLEPAQRQRFVSIVSDESARLTDVAQALAAFFDKAYTGTRSVTPVDEVDDFIFDRDNYFPELEQAATDFRAAAAIEGDCREAALVDYLRNTHGVQVIARPSTELDPTDVRHHAAFDTGTRTMVLAEAAPRPTRRFQLARLATELFHQGRAIDGVLARAGQLTTDAARRRARRALSSYLAAAVLLPYEAFLEAALRSRYDIDYLAQRFGASFEQVCHRVVALRRPGAAGVPFGLMRTDAAGFTSKRFPLPRLALPRHGPACPMWAIYQAFHVPGTVVRQLAEFPTGDRLLLIARTVEKTRPAFTLPRRFLSIMLACDALYADQTVYGDGLDLSSSAPAVPVGPNCRLCVRRDCLYREEDPIIDA*