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SCN18_25_1_16_R1_B_scaffold_154_1

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 581..1699

Top 3 Functional Annotations

Value Algorithm Source
PREDICTED: short-chain specific acyl-CoA dehydrogenase, mitochondrial-like n=1 Tax=Pantholops hodgsonii RepID=UPI0003C1A7D3 similarity UNIREF
DB: UNIREF100
  • Identity: 79.5
  • Coverage: 371.0
  • Bit_score: 589
  • Evalue 1.40e-165
Acyl-CoA dehydrogenase {ECO:0000313|EMBL:EDM47667.1}; TaxID=443152 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Marinobacter.;" source="Marinobacter algicola DG893.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 368.0
  • Bit_score: 495
  • Evalue 6.60e-137
acyl-CoA dehydrogenase domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 59.3
  • Coverage: 366.0
  • Bit_score: 446
  • Evalue 5.40e-123

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1119
ATGGATGCACAGAGTTACGAAGCTTTCCGCGCTAGCTTGCGACGGCTCGCCCTCGAGAGAATTGAGCCGCATGCCGCGGCTTATGACCGGGAACAACGTTTCCCGGAGGAATCGCTCGAAGCCTTCAAAGAGATGGGTCTCGTTTCGCTCGCCTTTTCGGAAGAGAATGGTGGGCAAGGAGGGGACGTCGTGTCCCAAGCCATCGCGCTTGAGGAACTCGGCCGTGTCTGTGCCACTTCCTCGCTAGTACTGATGGTGATCTGGGCAGGCCTCGGGCCAGTCGCAAAGCATGGATCGCAGAAGTTGCGCGCTGAGGTAATTCGTCCGGCAATGGCGGGAAATACAGTCGCGTCCATTTGCCTAACCGAACCCGCCGGAGGTTCGAATCTGTTTGGACTCAAAACGAGGGCCGAGAAGACCGGCAATGAGTGGGTGCTCAACGGTCAGAAGCGTTTCATCACCCATGCGACGCGATCCGATTGGTACACCGTGCTCGCGCGCACCGGTGAGAAGGCGCTAGGCCTCTTTTCTGTCCACAAGGACGATCCCGGCATTTCCTTCGGCAATCGCGAAGTCAAAATGGGGATTAGAGGCAGCCCGACGGCTGACGTCATCCTGGACAATTGCCGGATACCGGAGCACCGCGCGGTTGGCGATTCCAACAAAGGCTATCACTACATTAGCGACTCTCTTACTTGGACGCGCGTGCTGATTGCCGCGCAGGCGCTTGGCATCGCGCAGGGGGCTCTCGATCAAGCTGTGAAATATACTTCTGAACGCGAGCAGTTCGGCGAGACATTGTCTCGATTCCAGATGATCCGCGGCAAGATCGCCGACATGGCGACAGGGATCGAGGCGGGGCGCGCGCTTCTCTACCGTGCTGCGGGGAGCATCGACAACGGCGAGAGCGAAGCGCGGGCGCTGGCATCGATGGCAAAATTGTTCTGCAGCGACACGGCGATGCGTGTAACGACAGATGCCGTGCAACTCCATGGAGGTGCAGGTTATCTTGCGGACTTCCCGGTAGAGCGGATGATGCGCGATGCGAAGATCACGCAGATCTATGAGGGCGTGAACGAGATACAGCGCTTGATCATCGCCAAGCATGTCTACGGATAG
PROTEIN sequence
Length: 373
MDAQSYEAFRASLRRLALERIEPHAAAYDREQRFPEESLEAFKEMGLVSLAFSEENGGQGGDVVSQAIALEELGRVCATSSLVLMVIWAGLGPVAKHGSQKLRAEVIRPAMAGNTVASICLTEPAGGSNLFGLKTRAEKTGNEWVLNGQKRFITHATRSDWYTVLARTGEKALGLFSVHKDDPGISFGNREVKMGIRGSPTADVILDNCRIPEHRAVGDSNKGYHYISDSLTWTRVLIAAQALGIAQGALDQAVKYTSEREQFGETLSRFQMIRGKIADMATGIEAGRALLYRAAGSIDNGESEARALASMAKLFCSDTAMRVTTDAVQLHGGAGYLADFPVERMMRDAKITQIYEGVNEIQRLIIAKHVYG*