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SCN18_25_1_16_R1_B_scaffold_154_24

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(27435..28091)

Top 3 Functional Annotations

Value Algorithm Source
Putative transcriptional regulator, TetR-like n=1 Tax=Ralstonia syzygii R24 RepID=G3A7J0_9RALS similarity UNIREF
DB: UNIREF100
  • Identity: 44.7
  • Coverage: 217.0
  • Bit_score: 186
  • Evalue 2.70e-44
Putative transcriptional regulator, TetR-like {ECO:0000313|EMBL:CCA86465.1}; TaxID=907261 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Ralstonia.;" source="Ralstonia syzygii R24.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 44.7
  • Coverage: 217.0
  • Bit_score: 186
  • Evalue 3.80e-44
transcriptional regulatory protein similarity KEGG
DB: KEGG
  • Identity: 46.2
  • Coverage: 195.0
  • Bit_score: 177
  • Evalue 3.60e-42

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 657
ATGAAAAATCGCCGATCCCAGCAGGGAGCTTCTGCGACCGAAGGCAGTTCTTCGCCCAAGCCGACACGCGCGGAAAAGGTGGCGCGCAATAGGCAGGCGCTCCTGCGTTCCGGCGAGCGGGTTGTCGGTGAAGTCGGTTACGAAGAAGCATCCATTTCGAGAATTTCGGAAGGCGCCGGACTGGGCACCGGAACGTTCTACAAGCACTTTCAATCCCGGCAGTCTTTCTTTGACGTCCTGCTTCCCAGCGTTGGCGAAGAACTGCTTGAGGAGGTGCGGGAACAGATCAAGGGCTCCCGCAATGTTATGGAGATGGAAGAAACCGGCTTTCGGGGTTTCTTCGATTTTCTGACACGTCATCCAGGTTTTTATCGCCTTGTGAACGAAGCTGAGGTCGCGGCTCCCTCAGCGTTTGACAACCATATTGGGAATCTCGCCAAGCACTATATGAAGGCATTGAAGCGCAGCTTGAGCAACGGCGAGATAGAAGGTTATGACGAACGAGAACTGGAGGTCATCGTCTTTGTTCTTATGGCTGCCCGCTTTTACATCTATTTGCGCTTCTCGAAGGCGGGAAAGAAAGCACAGCACATCCCCGAATGGGTGATCCAAGCCTACATGAAGTTCGTTTTCCGAGGACTGAAAGGCAAAGGCTGA
PROTEIN sequence
Length: 219
MKNRRSQQGASATEGSSSPKPTRAEKVARNRQALLRSGERVVGEVGYEEASISRISEGAGLGTGTFYKHFQSRQSFFDVLLPSVGEELLEEVREQIKGSRNVMEMEETGFRGFFDFLTRHPGFYRLVNEAEVAAPSAFDNHIGNLAKHYMKALKRSLSNGEIEGYDERELEVIVFVLMAARFYIYLRFSKAGKKAQHIPEWVIQAYMKFVFRGLKGKG*