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SCN18_25_1_16_R1_B_scaffold_154_25

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 28248..29441

Top 3 Functional Annotations

Value Algorithm Source
ABC-type branched-chain amino acid transport systems, periplasmic component n=1 Tax=Magnetospirillum magneticum (strain AMB-1 / ATCC 700264) RepID=Q2W4U4_MAGSA similarity UNIREF
DB: UNIREF100
  • Identity: 58.7
  • Coverage: 402.0
  • Bit_score: 479
  • Evalue 2.80e-132
Leucine-isoleucine-valine-threonine-and alanine-binding protein {ECO:0000313|EMBL:KIL98772.1}; TaxID=272627 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodospirillales; Rhodospirillaceae; Magnetospirillum.;" source="Magnetospirillum magnetotacticum MS-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.0
  • Coverage: 402.0
  • Bit_score: 483
  • Evalue 1.60e-133
ABC-type branched-chain amino acid transport systems, periplasmic component similarity KEGG
DB: KEGG
  • Identity: 58.7
  • Coverage: 402.0
  • Bit_score: 479
  • Evalue 8.00e-133

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1194
ATGCTTCGAACAGGACTCGCCGCCAGCGCGCTCTTTATGGCTGTTGTTGCGCATGCAGCCGAGACACCCCCGATCAAGATCGGGGTATTGACGGATATGGCCGGGCCTTATGCCGCAATTACAGGAAAGGGCGCGGTTGTCGCGGCGAAACTTGCGATCGAGGATTTCCAGAAAGAAGCGCCTGACCAGAAGGTTGAGTTGCTTTCTGCGGATCATCAGAACAAGCCGGATATCGCCACGGGCATCGCCAGAAAGTGGTTCGATGTGGACGGTGTTTCTATGGTTTCTGAACTGACCACGTCAGCTGTGGCGTTGGCCGTCCAGAAGCTTGCTGAGGACAAAAACAGGGTCAGCATCGCGTCAGGAGCCGGGTCGTCCGATCTAACCGGAAAGGCCTGCAGCAAGACGGGATTCCACTGGACCTATGACACCTACGCGCTAGCAAATGGCACAGGCCGCGCGATTATGGATCAAGGTGCCAAACGCTGGTACTTCCTGACGGTCGACTATGCTTTCGGAAAGGCGCTGCAGGAGGATGTCACCCAGGCGGTTCGCGCCAAAGGTGGCGAAGTCATCGGTGAAGTCAAGCATCCGCTCAACACGTCAGATTTTTCGTCGTTTCTGCTTCAGGCCCAGCAATCGGGCGCGGATGTGATCGGACTTGCCAATGCTGGCGCCGACCTAATTAACTCCATCAAGCAAGCAAACGAGTTTGGGATTCCGCAGAAGCAACGGCTGGCGGCATTGCTGGTCTATATCACCGATGTGCATGCGCTCGGCCTTCCGGTTGCCAAGAACGTATTCTTGACGACCGCGTTCTACTGGAACGCCAACGACGAGACGCGTGCATGGTCGAAGCGATACTTCGATCAAATGGGATCAATACCCACGATGGCTCAAGCGGGCGTCTATTCCGGCGCGCTGCATTACTTACGTGCGGCTTCCAAGGCGAAATCGGTCGAGGGCGACAAGGTGGCGGGTGCAATGCGAGAAATAGCAGTTAACGACGCCTTCGCCAAAGGCGGGAAGGTGCGTGCGGACGGACGAATGGTTCACGACATGTATCTTGCCCAGGTAAAGGAGCCGCAGCAATCGAAGGGGCCGTGGGATTACTACAACATCGTGAAAGTCATCAAAGGCGACGAGGCGTTTCGCCCGATGGCGAATGGTGGATGCCCGCTGGTCGTCAAGTAA
PROTEIN sequence
Length: 398
MLRTGLAASALFMAVVAHAAETPPIKIGVLTDMAGPYAAITGKGAVVAAKLAIEDFQKEAPDQKVELLSADHQNKPDIATGIARKWFDVDGVSMVSELTTSAVALAVQKLAEDKNRVSIASGAGSSDLTGKACSKTGFHWTYDTYALANGTGRAIMDQGAKRWYFLTVDYAFGKALQEDVTQAVRAKGGEVIGEVKHPLNTSDFSSFLLQAQQSGADVIGLANAGADLINSIKQANEFGIPQKQRLAALLVYITDVHALGLPVAKNVFLTTAFYWNANDETRAWSKRYFDQMGSIPTMAQAGVYSGALHYLRAASKAKSVEGDKVAGAMREIAVNDAFAKGGKVRADGRMVHDMYLAQVKEPQQSKGPWDYYNIVKVIKGDEAFRPMANGGCPLVVK*