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SCN18_25_1_16_R1_B_scaffold_147_18

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 16238..16948

Top 3 Functional Annotations

Value Algorithm Source
Branched-chain amino acid transport ATP-binding protein LivF (TC 3.A.1.4.1) n=1 Tax=Rhodococcus sp. EsD8 RepID=N1M353_9NOCA similarity UNIREF
DB: UNIREF100
  • Identity: 57.4
  • Coverage: 235.0
  • Bit_score: 265
  • Evalue 3.80e-68
Leucine/isoleucine/valine transporter subunit {ECO:0000313|EMBL:KGA11351.1}; TaxID=1504320 species="Bacteria; Actinobacteria.;" source="actinobacterium acAcidi.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 58.5
  • Coverage: 234.0
  • Bit_score: 267
  • Evalue 1.40e-68
putative branched-chain amino acid ABC transporter ATP-binding protein similarity KEGG
DB: KEGG
  • Identity: 58.2
  • Coverage: 232.0
  • Bit_score: 264
  • Evalue 1.80e-68

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 711
ATGAGTCTGTTCAGCATCAAGGGAATGCACGCCGGTTACGGCGCGCGCAATGTGCTGCACGGGATCGACCTGGACGTCGAGGAGCGGCAGATTCAGGTGGTGCTCGGTGCCAACGGCGCCGGCAAGACCACGCTGTTACGCGCGATTTCCGGCACCATCGCCCGCGAAGGCACGATCCTGTTCGATGGGGCGCGTATCGATCGCCTGTCGGCGCGCAAGATCGTCGCGGCTGGCGTCGCGCATGTGCCGCAGGGACGCGGCACTTTCGCCGATCTGACGGTGGACGAAAATATCCGGCTCGGCGCTTATCTGCGCACGGGCGCGGAAGCGCGGCAGGATCGCGAACGCTGGCTGACGTTCTTTCCGCGTCTGCGCGAGCGGCTGTCGCAGCAAGCGGGCAGCCTCTCCGGCGGCGAGCAACAGATGCTGGCGATCACCCGCGCGCTGATGTTGAGGCCGCGATTGCTTTTGCTCGACGAGCCGTCGCTTGGTTTGGCGCCGATCATCACGCAGGGGCTGTTCAAGACCCTTGCCGCCATTCGCGAAGAAACCGGCATGACCATGCTGATCGTCGAACAGAGTGCCAATCTGGCGCTGGATGTGGCGGATTCCGGCGTGGTTCTCGAAAGCGGAGAGATCGTGCTGCGGGATTCCGCGCAGAATCTTGCGGGCAATGACGAGGTTCGCCGCATCTACTTGGGGTACGAATGA
PROTEIN sequence
Length: 237
MSLFSIKGMHAGYGARNVLHGIDLDVEERQIQVVLGANGAGKTTLLRAISGTIAREGTILFDGARIDRLSARKIVAAGVAHVPQGRGTFADLTVDENIRLGAYLRTGAEARQDRERWLTFFPRLRERLSQQAGSLSGGEQQMLAITRALMLRPRLLLLDEPSLGLAPIITQGLFKTLAAIREETGMTMLIVEQSANLALDVADSGVVLESGEIVLRDSAQNLAGNDEVRRIYLGYE*