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SCN18_25_1_16_R1_B_scaffold_147_23

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 21545..22243

Top 3 Functional Annotations

Value Algorithm Source
Crp-family transcriptional regulator (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L307_BORA1 similarity UNIREF
DB: UNIREF100
  • Identity: 38.4
  • Coverage: 190.0
  • Bit_score: 119
  • Evalue 3.30e-24
Uncharacterized protein {ECO:0000313|EMBL:KJC56075.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 40.1
  • Coverage: 217.0
  • Bit_score: 136
  • Evalue 3.70e-29
bacterial regulatory s, crp family protein similarity KEGG
DB: KEGG
  • Identity: 33.2
  • Coverage: 217.0
  • Bit_score: 120
  • Evalue 4.20e-25

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 699
ATGTCCCAGTCTCAGGCTGCGCTATCTCCTGCGGTGCGTCCGGGCGTCAGTGAGACCTTGCGTGTGCCGCAGGCAATGCTGGCCTATCTTCTTGGTGTCGCGCCGACGTTGGTGCGCCGCAAGTTCGCCAAGGGGCGGGCGCTCTACCGGCAGGATGAGGTGAGCGATCAAGTCTTTGTCGTGGTGTCGGGCCGCGTCGGCATCACTATGCTTCGTCCTGATGGGCAGGAACTGTTGATCGATATCGTCGGCTCCGGCGCGCTCTGCGGCGAGGGTGCGGCGTTCGACGGCTTGGCGCGCTTCTCCAGTGCCAGCGTCCTCGAGGATTGCGAAGTGCTGGTGATCCAGGCTGCGGATTTCTGCAAGCTGATGTCCACTCATGCCGCGCTCTCGCCGCTGGTGGTGCAGACGATCGCGCTGAAGCAACGGATGCTGGCAACGCGACTTGCGCAGGTGACGCAGGCATCTCCGGAAGTCCGTATCACTGAACTTCTGTCGCAGATCACGACACCGGATTCTCCGGCTATCGTCCTGACGCATCAGCAAATCGCCAATTTGATCGGCGCCTCGCGCATCACCGTAACGCGCGCGATGCAGAAATTGCGGCGCGACGGCGCGGTGCGCTGCAAGCGCGGCCAATACGAATTGGTGCGGTCGCAACTCGCGGACGCAATGATTGGCGAGCGCCCACAGGCCTAG
PROTEIN sequence
Length: 233
MSQSQAALSPAVRPGVSETLRVPQAMLAYLLGVAPTLVRRKFAKGRALYRQDEVSDQVFVVVSGRVGITMLRPDGQELLIDIVGSGALCGEGAAFDGLARFSSASVLEDCEVLVIQAADFCKLMSTHAALSPLVVQTIALKQRMLATRLAQVTQASPEVRITELLSQITTPDSPAIVLTHQQIANLIGASRITVTRAMQKLRRDGAVRCKRGQYELVRSQLADAMIGERPQA*