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SCN18_25_1_16_R1_B_scaffold_147_25

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(22841..23503)

Top 3 Functional Annotations

Value Algorithm Source
Crp-family transcriptional regulator (Fragment) n=1 Tax=Bordetella avium (strain 197N) RepID=Q2L307_BORA1 similarity UNIREF
DB: UNIREF100
  • Identity: 37.1
  • Coverage: 210.0
  • Bit_score: 139
  • Evalue 3.90e-30
Uncharacterized protein {ECO:0000313|EMBL:KJC52768.1}; TaxID=1615890 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP849.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 56.7
  • Coverage: 215.0
  • Bit_score: 254
  • Evalue 1.20e-64
bacterial regulatory s, crp family protein similarity KEGG
DB: KEGG
  • Identity: 46.5
  • Coverage: 213.0
  • Bit_score: 184
  • Evalue 3.00e-44

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 663
ATGACGAAAAAGAAACTCGGGACTTGGCGCATCGATCGGCAGCTCGTCGAACAGATCAGCCGACACGCCGCCTTTGGCCGCCGCCGCAAGTTCAAGAAAAACGCCATGCTCTATGAGCAGGGTGAAGTCTCGACGCGGTTCTATTTCGTGCTCAAGGGATTGGTGCAGATCTCGATCTTTCGCGCCGACGGCTCCGAGGTCGTATTGGAGTTGATGGGACCGGAAACCGTTTGCGGCGAGGGCTCGGCCTTTGACGGGCTGCCGCGCTTTTCCAGTGCCGCCGCCATCGAGGATACCGAGGCGATCGAGTTCGATACCTCGAAGATGACCGAGATTTTCCGCGCTCATCCGGAGTTCGCGACTTCGCTGCTGCGCGTCACCAGCCTGAAACAGCGCGTCGTCGCGATCCGCTTGAAACATCTCGCGTCACGCGAGCCGCAAGACCGCATCATGGAGTTACTGACGCGGCTCGAGGAAATGTTCGCGATCGATCACCCGAAAGGGCGGCTATTGGTCACTCACGTCACGCATGAGCAGATCGCGACCATGACCGGCACGTCACGCGTGACGGTGACGCGTACCTTGCAGCGGCTGCGCGAGCAAAACCGCATCGACATCGTCGACGGTCATATCCTGCTCAAACGCCGACCTTGTGCCGGTTGA
PROTEIN sequence
Length: 221
MTKKKLGTWRIDRQLVEQISRHAAFGRRRKFKKNAMLYEQGEVSTRFYFVLKGLVQISIFRADGSEVVLELMGPETVCGEGSAFDGLPRFSSAAAIEDTEAIEFDTSKMTEIFRAHPEFATSLLRVTSLKQRVVAIRLKHLASREPQDRIMELLTRLEEMFAIDHPKGRLLVTHVTHEQIATMTGTSRVTVTRTLQRLREQNRIDIVDGHILLKRRPCAG*