ggKbase home page

SCN18_25_1_16_R1_B_scaffold_231_2

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 407..2473

Top 3 Functional Annotations

Value Algorithm Source
Cytochrome b n=1 Tax=Afipia clevelandensis ATCC 49720 RepID=K8NUM7_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 82.4
  • Coverage: 689.0
  • Bit_score: 1199
  • Evalue 0.0
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=29448 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium elkanii.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 690.0
  • Bit_score: 1203
  • Evalue 0.0
cytochrome b/c1 similarity KEGG
DB: KEGG
  • Identity: 81.0
  • Coverage: 688.0
  • Bit_score: 1191
  • Evalue 0.0

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2067
ATGAGCGGACCCTCGACCTACCAGCCACAAAACGGCTTCCTGAAATGGCTGGAAACGCGCCTGCCGATCGGCGGCCTCATCCACTCCTCGTTCGTGGCCTATCCGACGCCGCGCAACCTGAACTACTGGTGGACCTTCGGCGGCATCCTCTCGATGATGTTGGCGCTTCAGATCGTCACCGGCATCATCCTGGCGATGCACTATACGCCGCACGTCGATATGGCCTTCAACTCGGTTGAGGCGATCGTTCGTGACGTCAACTACGGCTGGCTGCTGCGCAACATGCACGCCGCCGGCGCATCGATGTTCTTCATCGCCGTTTACATTCACATGTTCCGTGGCCTCTATTACGGATCATACAAGGCGCCACGCGAAGTGCTCTGGATTCTCGGCGTCATCATCTATCTGCTGATGATGGCTACGGGCTTCATGGGCTACGTGCTGCCGTGGGGCCAGATGAGCTTCTGGGGCGCCACCGTCATCACCAATCTGTTCTCGGCCATTCCTTACGTCGGCGAGAGCATCGTGACGCTGCTGTGGGGTGGCTATTCGGTCGGCAACCCGACGCTGAATCGCTTCTTCTCGCTGCACTACCTGCTGCCGTTCGTGATCGCCGGCGTCGTCGTGCTGCACGTCTGGGCCCTGCACGTCGCCGGTCAGAACAACCCGGCCGGCGTCGAGCCGAAGACCGAGAAGGACACCGTGCCGTTCACGCCTTACGCGACCATCAAGGACGGGTTCGGCATGGCCTGCTTCCTGATCTTCTTCGCCTGGTTCATCTTCTACATGCCGAACTATCTCGGCGACGCGGAGAACTACGTGCAGGCCAATCCGGGCGTCACCCCGGCGCACATCGTGCCTGAATGGTACTACCTGCCGTTCTACGCGATCCTGCGCTCGATCCCGAGCAAGCTCGGCGGCGTCATCGCGATGTTCAGCGCCATCCTCGTGCTGGCCTTCCTGCCGTGGCTCGACAGTGCCAAGACCCGTTCGCTGCGCTATCGTCCGCTCGCGAAGCAGTTCTTCTGGATCTTTGTCGTGATCTGCGTGCTGCTGGGCTGGCTCGGCGGCAAGCCGGCTGAGGGCGTCTACGTCACCGTCGGCCGCATCCTGACGTTCTGCTACTTCGCCTACTTCCTGATCGTGCTGCCGATCCTCAGCCGCATCGAGACGCCGCGCGCGGTGCCGAACTCGATCGCCGACGACGTGCTGGCGAAGTCCCGCAAGAAGGCGGTTGCATCGATCGCGGTGGCGTTGCTGGCTGGTGCCGCGCTGCTCACCGGCGGCGTGCAGCAGGCCAAGGCGGCGGATCATTCCGACACCCCGCCGTCGCAGTCGTGGTCGTTCGCGGGTCCGTTCGGCAAGTTCGATCGTGGCGCCTTGCAGCGCGGCTACAAGGTTTACAAGGAAGTTTGCTCGACCTGCCACTCGATGAACCTGTTGCACTTCCGCAATCTTTCCGATGAGGGCGGCCCGGGCTTCACCCCGGCGCAGGCGGCGGCGGTTGCGGCCGAGTACAAGGTGCAGGACGGACCGAACGACGCCGGCGAGATGTTCGAGCGTCCGGGTCGCGTCGCCGACAAGTTCCCGGCGCCGTTCCCGAACGAGAACGCAGCACGCGCCTCCAACGGCGGTGCGGCACCGCCGGACCTGTCGCTGATCGCCAAGGCACGGTCTTATGAGCGTGGTTTCCCGCAGTTCATCTTCGACTTCTTCACCCAGTTCCAGGAGCAGGGCCCGAACTACGTCGATGCGATCTTGCAGGGTTATGCCGATAATCCGCCGGCCGGCGTGACCATTCCCGAGGGTGCGTACTACAACAAGTACTTCCCCGGTCATGCCATCAAGATGCCGAAGCCGCTGTCGAACGACCAGGTCACCTACGACGACGGCACGCCGCAGACCGTCGCGCAGTATGCGCATGACGTGGCGACGTTCCTGATGTGGACGGCCGAGCCGCATCTCGAAGCGCGTAAGCGCCTCGGCATGCAGGTGATGATCTTCCTCATCATCTTCGCGGGCCTCTTGTACTTCACCAAGAAGAAGGTCTGGGCCAACGCGCATTGA
PROTEIN sequence
Length: 689
MSGPSTYQPQNGFLKWLETRLPIGGLIHSSFVAYPTPRNLNYWWTFGGILSMMLALQIVTGIILAMHYTPHVDMAFNSVEAIVRDVNYGWLLRNMHAAGASMFFIAVYIHMFRGLYYGSYKAPREVLWILGVIIYLLMMATGFMGYVLPWGQMSFWGATVITNLFSAIPYVGESIVTLLWGGYSVGNPTLNRFFSLHYLLPFVIAGVVVLHVWALHVAGQNNPAGVEPKTEKDTVPFTPYATIKDGFGMACFLIFFAWFIFYMPNYLGDAENYVQANPGVTPAHIVPEWYYLPFYAILRSIPSKLGGVIAMFSAILVLAFLPWLDSAKTRSLRYRPLAKQFFWIFVVICVLLGWLGGKPAEGVYVTVGRILTFCYFAYFLIVLPILSRIETPRAVPNSIADDVLAKSRKKAVASIAVALLAGAALLTGGVQQAKAADHSDTPPSQSWSFAGPFGKFDRGALQRGYKVYKEVCSTCHSMNLLHFRNLSDEGGPGFTPAQAAAVAAEYKVQDGPNDAGEMFERPGRVADKFPAPFPNENAARASNGGAAPPDLSLIAKARSYERGFPQFIFDFFTQFQEQGPNYVDAILQGYADNPPAGVTIPEGAYYNKYFPGHAIKMPKPLSNDQVTYDDGTPQTVAQYAHDVATFLMWTAEPHLEARKRLGMQVMIFLIIFAGLLYFTKKKVWANAH*