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SCN18_25_1_16_R1_B_scaffold_201_21

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 42724..43110

Top 3 Functional Annotations

Value Algorithm Source
Two-component response regulator n=1 Tax=Bradyrhizobium diazoefficiens (strain JCM 10833 / IAM 13628 / NBRC 14792 / USDA 110) RepID=Q89SW5_BRADU similarity UNIREF
DB: UNIREF100
  • Identity: 66.1
  • Coverage: 124.0
  • Bit_score: 165
  • Evalue 2.90e-38
Two-component response regulator {ECO:0000313|EMBL:KFC64604.1}; TaxID=1502851 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bosea.;" source="Bosea sp. LC85.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.3
  • Coverage: 123.0
  • Bit_score: 167
  • Evalue 1.10e-38
PAS domain S-box similarity KEGG
DB: KEGG
  • Identity: 66.7
  • Coverage: 120.0
  • Bit_score: 166
  • Evalue 3.70e-39

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 387
ATGGCTAAGATCCTTCTCGTTGAAGACAACGAAATGAACCGTGACATGCTTACGCGGCGCCTTCAGCGTCAGGGCTTTGTCGTGGTTTGCGCTTGCGACGGCGCGGAAGGCGTCGCCATGGCCACGAGCGAGATGCCCGATCTGATCCTGATGGATGTCGCGCTCGGCGAGATGGATGGCTGGGAGGCGACCACGCTGATCAAGGCCGATCCCGCCACGACCGCGATCCCGATCATTGCGCTGACGGCTCATGCGCTTGCCAGCGATCGCGACCGTAGCGTCGAGGTTGGCTGTTCCGACTTCGACACCAAGCCGGTCGATTTGCAACGTCTGCTCGGGAAAATTCGCGGCTGCCTGAGTGCGGCCGCGCAAGTGGCGGTCGTCTGA
PROTEIN sequence
Length: 129
MAKILLVEDNEMNRDMLTRRLQRQGFVVVCACDGAEGVAMATSEMPDLILMDVALGEMDGWEATTLIKADPATTAIPIIALTAHALASDRDRSVEVGCSDFDTKPVDLQRLLGKIRGCLSAAAQVAVV*