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SCN18_25_1_16_R1_B_scaffold_201_27

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(50559..51974)

Top 3 Functional Annotations

Value Algorithm Source
Type I secretion outer membrane protein, TolC n=1 Tax=Rhodopseudomonas palustris (strain BisB5) RepID=Q139U7_RHOPS similarity UNIREF
DB: UNIREF100
  • Identity: 75.7
  • Coverage: 469.0
  • Bit_score: 679
  • Evalue 1.30e-192
Type I secretion outer membrane protein, TolC similarity KEGG
DB: KEGG
  • Identity: 75.7
  • Coverage: 469.0
  • Bit_score: 679
  • Evalue 3.70e-193
Type I secretion outer membrane protein, TolC {ECO:0000313|EMBL:ABE39142.1}; Flags: Precursor;; TaxID=316057 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 75.7
  • Coverage: 469.0
  • Bit_score: 679
  • Evalue 1.80e-192

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1416
ATGACAGGGCAGGCGTCGAGAGTTGGCGCGGCATCGCGGCCGCGGCGTTCGGCCATCCTGCTCGCGATTCCGTTCTGCGCCTGGCTTGTCCCGGCCCCCGGCCATGCCGAAACCATCGCCGATGCGCTGGTGAAAGCTTACCAGACCAATCCGCAACTCAATGCCGAGCGCGCCCGCCAGCGCGCCACCGACGAGAATGTGCCGCAGGCGCTGGCCGGCTATCGGCCGCAGATCATCGCCAGCCTGAGCGGCGGGATGCAAGCCGTCCGCAACCTGCTTCCGGACAACTCGATCCAGACCGCGACACAGAAACCGTGGACCATCGGCGTGACGGTGACGCAGACGCTGTTCAACGGCTTCAAGACCGCCAACAGCGTGCGCGTCGCCGAGCTTCAGGTGAAATCCGGCCGCGAGGCGTTGCGCAACGTCGGGCAAGGCGTGCTGCTCGACGCCGTGACCGCCTATACCAATGTGCTCGCCAACCAGTCGCTGGTGGATGCGCAGCGCGCCAATGTCGCCTCACTGCGGGAAACACTGAATGTGGCGCAGCGGCGGCTCAACGCCGGCGACGTGACGCCGACCGACACCGCGCAGGCGGAAGCGCGGCTCAATCGCGGACTGGCGGACCAGAACGCGGCCGAAGTCGCACTCGCTGTCAGCCAGGCCACCTATACGCAGGTCATCGGCCAGGCGCCGGGCCGGCTCAGCCCGGCCGAGCCGGTGGTGCGGCTGGTGCCGCGCAGCCGCGATGAGGCCACCGCGCTGGCCTTCCGCGCCAACCCGGCGGTGCTGGCGGCGGGCTTCGACGCCGACATGGCCGAGAAGACGATCAACGTCGCGGAAAGCAGCCTCTATCCGACCGTCACCGTGCAGGGCGGCGCCAGCCGCTCGCGGCAGACCGATACCACGCTCGGCACCAACGGCACCGATGAGGCCTATGTGCTCGGCCAGATCACCGCGCCGATCTACGACGGCGGCACCGCCGCCTCGCAGACCCGACAAGCCAAGGAACTCGCCTCGCAAAGCCGCTTGGTGCTGGAGCAGGTCCGCAATCAGGCGCGCACCGCCGCCATCGCCGCCTGGGTCTCCTACGAAGGTGCGCGGACCGCGGTCGGTGCGGCGGAATCCGAAGTGCGCGCGGCTACCGTCGCACTCGATGGCGTCCGCAAGGAGGCGCAGGGCGGCCAGCGCACCACCGTGGACGTGCTCAACGCGCAACAGGATCTGGTGGCGGCCAAGGCGCGATTGATCGGCGCGCAGCGCGATCGCGTGATCGCCTCCTACACGCTGCTTGGCGCGGTCGGCAGTCTCGACGTCAAAACGCTCGGCCTGCATACGCCGGACTATCTGCCGGAGGTCCATTACCACCAGGTGCGTGATGCCTGGCACGGCCTGCGCACGCCTTCGGGCAAATAG
PROTEIN sequence
Length: 472
MTGQASRVGAASRPRRSAILLAIPFCAWLVPAPGHAETIADALVKAYQTNPQLNAERARQRATDENVPQALAGYRPQIIASLSGGMQAVRNLLPDNSIQTATQKPWTIGVTVTQTLFNGFKTANSVRVAELQVKSGREALRNVGQGVLLDAVTAYTNVLANQSLVDAQRANVASLRETLNVAQRRLNAGDVTPTDTAQAEARLNRGLADQNAAEVALAVSQATYTQVIGQAPGRLSPAEPVVRLVPRSRDEATALAFRANPAVLAAGFDADMAEKTINVAESSLYPTVTVQGGASRSRQTDTTLGTNGTDEAYVLGQITAPIYDGGTAASQTRQAKELASQSRLVLEQVRNQARTAAIAAWVSYEGARTAVGAAESEVRAATVALDGVRKEAQGGQRTTVDVLNAQQDLVAAKARLIGAQRDRVIASYTLLGAVGSLDVKTLGLHTPDYLPEVHYHQVRDAWHGLRTPSGK*