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SCN18_25_1_16_R1_B_scaffold_201_29

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 53291..54097

Top 3 Functional Annotations

Value Algorithm Source
Linocin-M18 n=1 Tax=Pseudomonas sp. (strain M1) RepID=L1HQI6_PSEUO similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 268.0
  • Bit_score: 445
  • Evalue 3.10e-122
Bacteriocin {ECO:0000313|EMBL:KIO48426.1}; TaxID=58133 species="Bacteria; Proteobacteria; Betaproteobacteria; Nitrosomonadales; Nitrosomonadaceae; Nitrosospira.;" source="Nitrosospira sp. NpAV.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 84.0
  • Coverage: 268.0
  • Bit_score: 451
  • Evalue 7.80e-124
Linocin_M18 bacteriocin protein similarity KEGG
DB: KEGG
  • Identity: 78.7
  • Coverage: 267.0
  • Bit_score: 427
  • Evalue 1.90e-117

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 807
ATGAATAATCTCCATCGCGAACTGGCGCCGATCTCGGATGCGGCCTGGGCTCAGATCGAGGAGGAGGCGTCCCGCACGCTCAAGCGTCATCTCGCGGCGCGGCGGGTGGTAGACGTTCCGGAGCCGAAGGGCCTCGGTCTCGCGGTGGTCGGCACCGGACACCTGCATCAGATCCAGTCTCCCGGCGACGGCATCCTCGCCGCCCAGCGCGAGGCGAAGGCGATCGTCGAACTGCGCGTCCCGTTCGAACTGACGCGGCAGGCGATCGACGACGTGGCGCGAGGCGCGGCCGATTCCGACTGGTCGCCGCTGAAGGAGGCCGCGCGCAAGATCGCTTTCGCGGAGGATCGCGCGGTGTTCGACGGCTACGCCGCCGCCGGCATCGAAGGCATTCGCGCCGGCGCCAGCAACCCCGGCGTGGTGCTGCCGTCGAATGTGCGCGGCTATCCGGCTGCGGTCGCGCAGGCGGTCAGCCAGTTGCGGCTTGCCGGTTGCGAAGGCCCCTATGCGCTGGCGCTTGGCGCGGATGCCTATACCGCGATCAGCGGCGGCAGCGACGAAGGCTATCCGGTCTATCACCACATTGAGGGCATCGTCGAAGGCGGCATCATCTGGGCGCCGGCCATTACCGGCGGTTTCGTGCTGACGACGCGCGGCGGCGACTTCGAACTCGATATCGGCCAGGACGTCTCGATCGGCTACGCGAGCCATTCGGCGACCGCGGTGGAACTGTACTTTCTGGAGACCTTCACCTTCCGGCTGTTGACGACGGAGGCGGCTGTCGTTCTCGCTCCGCCGAAAAAATAA
PROTEIN sequence
Length: 269
MNNLHRELAPISDAAWAQIEEEASRTLKRHLAARRVVDVPEPKGLGLAVVGTGHLHQIQSPGDGILAAQREAKAIVELRVPFELTRQAIDDVARGAADSDWSPLKEAARKIAFAEDRAVFDGYAAAGIEGIRAGASNPGVVLPSNVRGYPAAVAQAVSQLRLAGCEGPYALALGADAYTAISGGSDEGYPVYHHIEGIVEGGIIWAPAITGGFVLTTRGGDFELDIGQDVSIGYASHSATAVELYFLETFTFRLLTTEAAVVLAPPKK*