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SCN18_25_1_16_R1_B_scaffold_229_14

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 7636..8685

Top 3 Functional Annotations

Value Algorithm Source
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Transcriptase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; TaxID=566679 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. ORS 375.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.6
  • Coverage: 343.0
  • Bit_score: 654
  • Evalue 7.90e-185
rpoA; DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6) similarity KEGG
DB: KEGG
  • Identity: 95.3
  • Coverage: 343.0
  • Bit_score: 652
  • Evalue 4.70e-185
DNA-directed RNA polymerase subunit alpha n=1 Tax=Bradyrhizobium sp. ORS 375 RepID=H0SJ41_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 95.6
  • Coverage: 343.0
  • Bit_score: 654
  • Evalue 5.60e-185

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1050
ATGGCAAAGCTGGCCTGTATGGGTGAAACAGTGACGATCCAGAAAAATTGGCAAGAATTGATCCGCCCCAGCAAGCTGCAAGTGACGCCGGGCGCGGACGCTACCCGTTTCGCGACCCTCGTCGCCGAGCCGCTCGAGCGTGGTTTCGGCCAGACGCTGGGCAATGCGCTCCGCCGCATTCTGCTGTCCTCGCTGCAAGGCGCGGCGGTGCAGTCGGTGCACATCGACGGTGTGCTGCACGAGTTCTCCTCGATTGCCGGCGTGCGTGAAGACGTCACCGACATCGTGCTGAACATCAAGGACATCTCGATCAAGATGCAGGGCGAAGGCCCGAAGCGCATGGTCGTGAAGAAGCAGGGGCCGGGCACCGTTACCGCGGGCGACATCCAGACCGTCGGCGACATCACCATCCTCAATCCGGAATTGCAGCTTTGCACGCTGGATGACGGCGCTGAAATCCGCATGGAATTCACCGTCAACACCGGCAAGGGCTACGTCGCCGCCGAGCGCAATCGTCCGGAAGACGCGCCGATCGGCCTGATCCCGGTCGACAGCCTGTATTCGCCGGTGCGCAAGGTGTCGTACAAGGTCGAGAACACCCGCGAGGGCCAGATCCTCGACTACGACAAGCTGACCATGACCATCGAGACCAACGGCGGCATCACGCCGGAAGACTCCGTGGCCTATGCCGCACGCATCCTGCAAGACCAGCTCAACGTGTTCGTCAACTTCGAAGAGCCGCGCAAGGAAGTGGCCGCCGAGATCATTCCGGATCTGGCGTTCAACCCGGCGTTCCTCAAGAAGGTCGACGAGCTGGAGTTGTCGGTGCGCTCCGCCAACTGCCTGAAGAACGACAACATCGTCTACATCGGCGACCTGGTTCAGAAGTCGGAAGCGGAGATGCTGCGTACCCCGAACTTCGGCCGCAAGTCGCTGAACGAGATCAAGGAAGTGCTGGCCCAGATGGGTCTGCATCTCGGCATGGAAGTGCCCGGTTGGCCGCCGGAAAACATCGACGAGCTGGCCAAGCGCTTCGAGGATCACTACTAA
PROTEIN sequence
Length: 350
MAKLACMGETVTIQKNWQELIRPSKLQVTPGADATRFATLVAEPLERGFGQTLGNALRRILLSSLQGAAVQSVHIDGVLHEFSSIAGVREDVTDIVLNIKDISIKMQGEGPKRMVVKKQGPGTVTAGDIQTVGDITILNPELQLCTLDDGAEIRMEFTVNTGKGYVAAERNRPEDAPIGLIPVDSLYSPVRKVSYKVENTREGQILDYDKLTMTIETNGGITPEDSVAYAARILQDQLNVFVNFEEPRKEVAAEIIPDLAFNPAFLKKVDELELSVRSANCLKNDNIVYIGDLVQKSEAEMLRTPNFGRKSLNEIKEVLAQMGLHLGMEVPGWPPENIDELAKRFEDHY*