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SCN18_25_1_16_R1_B_scaffold_301_19

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 19263..20150

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, LysR family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21B87_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 292.0
  • Bit_score: 388
  • Evalue 3.70e-105
LysR family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 292.0
  • Bit_score: 388
  • Evalue 1.10e-105
Transcriptional regulator, LysR family {ECO:0000313|EMBL:ABD86349.1}; TaxID=316056 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisB18).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 68.2
  • Coverage: 292.0
  • Bit_score: 388
  • Evalue 5.20e-105

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 888
ATGCGATTCGATCTGGTCGATCTTCAGGTGTTTGTCGCGGTGGCGGAAGCGCGCAGCATTACCCGCGGTGCAGCGCGCGCCAACCTGGCGCTGGCGTCCGCCAGCGAGCGCATCAAGACACTGGAATCCGCGCTCGACGTGACGCTGCTGCGGCGCGGCCGCCATGGCGTCACGCTGACGGACGCCGGCGAAAGCCTGCTTGATCATGCCCGCGTGGTGCTGGCGGCGGCGGACAATCTGCGCGGCGATCTCGCCGGCTACGCGCGCGGGATCAAGACCAGCATCCATGTGCTGGCGAACACGTCGAGCCTGTCGGAGCACCTGCCGCCCGCGCTGGCGAGCTTTCTGCGCGATCATCCGCAGGTGAACATCGACGCGGAAGAACTGGAAAGCATCGGCATCGCAGAAGCCATCGCGGCAGGCCGCGCCGATATCGGGATCGCGGTGGAACAGACTTTACCATCCGGCATCGAACGCTTTCCGTTTCGCGACGACCGGCTGGTGCTTGCGGTTTCCGCGCAGGACGATCTCGCCCACCGCCGCGTCGTCGATTTCGGTGCGGTGACAACGCGTGATTTCGTCGGGCTTGCCACCGCGAGCGCGCTGCAAAGCCATCTCGCGACGCAGGCGGCGCGGCTCGGCGCGCGCCTGCGGTTTCGCGCGCGGCTGCGCGACTTCGATGCCGTGTGCCGCCTGGTCGCCGCCGGCGTCGGTATCGCGGTCATCCCGGAAGCAGCGGCGAAGCGTTGCGCGCGGGTGATGGCGATCAAGTCGGTGCGAATTCGCGATGCGTGGGCAACACGGCGACTTGCGATCTGCGTGCGCAATTTGAAAGCGCTGCCGCGCCCGGCACAACAGTTGGTGGCGCACCTGCGTGGCGGCGATTAG
PROTEIN sequence
Length: 296
MRFDLVDLQVFVAVAEARSITRGAARANLALASASERIKTLESALDVTLLRRGRHGVTLTDAGESLLDHARVVLAAADNLRGDLAGYARGIKTSIHVLANTSSLSEHLPPALASFLRDHPQVNIDAEELESIGIAEAIAAGRADIGIAVEQTLPSGIERFPFRDDRLVLAVSAQDDLAHRRVVDFGAVTTRDFVGLATASALQSHLATQAARLGARLRFRARLRDFDAVCRLVAAGVGIAVIPEAAAKRCARVMAIKSVRIRDAWATRRLAICVRNLKALPRPAQQLVAHLRGGD*