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SCN18_25_1_16_R1_B_scaffold_527_22

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 22973..24556

Top 3 Functional Annotations

Value Algorithm Source
crotonobetaine/carnitine-CoA ligase n=1 Tax=Bradyrhizobium elkanii RepID=UPI00035E3DB1 similarity UNIREF
DB: UNIREF100
  • Identity: 81.3
  • Coverage: 525.0
  • Bit_score: 897
  • Evalue 3.40e-258
AMP-dependent synthetase {ECO:0000313|EMBL:KJC51570.1}; TaxID=1619232 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSP885.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.7
  • Coverage: 525.0
  • Bit_score: 904
  • Evalue 3.90e-260
putative crotonobetaine/carnitine-CoA ligase similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 524.0
  • Bit_score: 877
  • Evalue 1.80e-252

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1584
ATGTCCACATCAGCCGCGCCCGGCATCGTCGGCCCGTTCGCAGGACTCGACGTTCCATGGCTGTTGCGGATGCAGGCCGCGACCCGTGGCGACCATCCCTTCCTGATCTGGGCGCCGTTCGACGGTCCATCGCGCTCATGGAGCTATCGCGAGTTCGACGAACGGGTCGGCGCGCTGGCGGCCGGTCTTGCCAAGCGCGGCGTCGTACAGGGCGACCCGGTCCTCATCCATCTCGACAACTGCGTCGAGATGATGCTGGCGTGGTTCGCCTGCGTCGAACTCGGCGCCATCGCCGTCACCACCAACACCCGCTCCGCGGCGGCGGAGATGACCTATTTTGCCGATCATTGCGGCGCCGTCGCCGCCATCACCCAGCCGGCCTATGCCGAACTGGTGGCGCAGAACTGCAAGAGCCTGCGCTGGCTGGCGGTTACGTCGCACGACGCCGGCGCCGCTCCGGCGCAGGGCCGCGCACCGCAGCAGGCCGACCGCTTCGAGACGTTGTTCGCCGACAGCGCCGACCGGCCGCAACGCCCGACTGACCCCTTCGCACCGTGCAGCGTGCAGTACACCTCGGGGACGACTTCGCGGCCCAAGGCGGTGCTATGGACTCATGCCAATGCGCTGTGGGGCGCAAAGATCAACGCCGCGCATCAGGACCTCCATGCCGGCGACGTCCACCAGACTTATCTGCCGCTGTTTCACACCAACGCGCTGGCCTATTCGATGCTGTCGAGCTTGTGGGTCGGCGGCACCTGCGTGATCCAGCCACGCTTCTCGGCACGGCGCTTCTGGAACGTCGCCTCTGAGCATCGCTGCACCTGGACCTCGACCATCCCGTTCTGCATCAAGGCGCTGCTCGAACACGAAATTCCGAAACAGCACACATTCCGGCTGTGGGGCACGGCGGTATGCGACCCGCCGCCGTTCGCTGCGCTCGGCGTCAAGATGATCGGCTGGTGGGGCATGACCGAAACCATCACCCACGGCATCGTCGGCGAGGTCGACCAGCCCAACACGCCGATGTCGATCGGCCGCGCCGCCGCCGAGTACCAGATCCGCATCGTCGACGACAACGGCGCACCCACCGCCGTCGGCGACACCGGCAACCTGCTGATCAAGGGCATTCCCGGCCTGTCGCTGTTCAAGGAATACCTGCACAACGAACAGGCCACCCGCGAGAGCTTCGACGAGCACGGCTATTTCATCACCGGCGACCGCATCACCCTGCTGGAAAACGGCTTCATGAAATTCGGCGACCGCGCCAAGGACATGCTCAAGGTCGGCGGCGAGAACGTCGCAGCTTCCGAGATCGAACAGGTGATCATCACCGTTCCGGGCGTTCGCGAGGCCGCCGTCGTCGCCAAGAAGCACCCGATGCTCGACGAAGTGCCGGTGGTGTTCATCATCCCGCAGACCGGCACCGCGAAAATTCCGGAGACCTTGCATGACGACGTGCTGACGGCCTGCCGTAAGGCGCTCGCCGACTTCAAGGTGCCACGCGAAGTGCATTTCGTCGACGACATGCCGCGCTCGACGCTGGAGAAAGTCGCCAAGAACGAGCTACGCAAACTGCTTGCGTGA
PROTEIN sequence
Length: 528
MSTSAAPGIVGPFAGLDVPWLLRMQAATRGDHPFLIWAPFDGPSRSWSYREFDERVGALAAGLAKRGVVQGDPVLIHLDNCVEMMLAWFACVELGAIAVTTNTRSAAAEMTYFADHCGAVAAITQPAYAELVAQNCKSLRWLAVTSHDAGAAPAQGRAPQQADRFETLFADSADRPQRPTDPFAPCSVQYTSGTTSRPKAVLWTHANALWGAKINAAHQDLHAGDVHQTYLPLFHTNALAYSMLSSLWVGGTCVIQPRFSARRFWNVASEHRCTWTSTIPFCIKALLEHEIPKQHTFRLWGTAVCDPPPFAALGVKMIGWWGMTETITHGIVGEVDQPNTPMSIGRAAAEYQIRIVDDNGAPTAVGDTGNLLIKGIPGLSLFKEYLHNEQATRESFDEHGYFITGDRITLLENGFMKFGDRAKDMLKVGGENVAASEIEQVIITVPGVREAAVVAKKHPMLDEVPVVFIIPQTGTAKIPETLHDDVLTACRKALADFKVPREVHFVDDMPRSTLEKVAKNELRKLLA*