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SCN18_25_1_16_R1_B_scaffold_540_8

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(7120..9996)

Top 3 Functional Annotations

Value Algorithm Source
Diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(S) n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TV7_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 88.8
  • Coverage: 958.0
  • Bit_score: 1679
  • Evalue 0.0
Diguanylate cyclase {ECO:0000313|EMBL:KJC60623.1}; TaxID=1619233 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. LTSPM299.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 89.4
  • Coverage: 958.0
  • Bit_score: 1687
  • Evalue 0.0
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase similarity KEGG
DB: KEGG
  • Identity: 88.8
  • Coverage: 958.0
  • Bit_score: 1679
  • Evalue 0.0

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2877
TTGCGTCCGATCAGGTTTCTTGCGCTGCTGGCGCTCGGCCTCACGCTTTGGGTTTCGATGTTGCCCGCCTATGCCGTCGACGCGGTCAGCGTCCGCAGCGACGCAGCCGCCATCGATCTCACCGCGGTTCTCGAACACCAGCATAGCGACACCGACCGGATTCAGGTGTCCACCGCGCCCGGCACCGACGGCATCGTGCGCCGCGTCGAAGTGCGCGCGCGCGAAGGCGGGCAGAACTGGGTGGTGTTCGCACTCGCCAACAACACCGACGATCAGCTCGACCGCCTGATCGTCGCGCCGCATTATCGCATCGTCTCGTCCGGCCTGCTGTGGCCCGACCTTGGCCTGTCGCGCATCGCGACCATCACGCCGTCGACCGGCGATAGACCCGAGCGTCAGGAAAATCCCACCGCCGACGTGTTTCGCATCACGCTCGATCCGGGCGCGGTGATTACCTTCGTCGCCGAACTGCGCACCGACAAGCTGCCGCAGCTCTATCTGTGGGAGCCCGACGCCTACAAGGACAAGGTCAACTCCTTCACGCTGTATCAGGGCATCGTCATCGGCATCTCCGGCCTGCTGGCGCTGGTGTTGACGATCCTGTTCGTGGTGAAGGGCAGCATCATGTTTCCCGCCGCCGCCGCGCTGGCGTGGGCGGTGCTGGTCTATATCGGCGTCGACTTCGGCTTCTGGGGCAAGGTGCTGGATATGTCCGCCGGCGCCGAGCGGATCTGGCGAGCATCGGGCGAAGCGATCCTCGCCGCGACGCTGCTGGTGTTCCTGTTCGCCTATCTCAATCTCAACCGATGGCATGTGCGCTATTCGCACATCACGCTGGGCTGGCTTGCCTTCCTCGGCTCATTGGTAGCACTGGCGCTGTTCGATCCCGCAGTCGCGTCCGGCATCGCGCGCATCTCGCTGGCGATGATCGCGGTGTTCGGCTTTGCGCTGATCGTCTATCTCTCGACCCACGGCTACGACCGCGCGGTGCTGCTGATCCCGACCTGGTTCCTGCTGGTAGTGTGGGTGATCGCCGCCGGCATGACGGTGGAAGGCAGCGTCACCAACGACATTGTCGGCCCGGCATTGCTCGGCGGCCTGGTACTGATCGTGATGCTGATCGGCTTCACGGTGATGCAGCACGCTTTCGCCGGCGGCGCGGCCGGCGGCATCGTTTCCGATGTCGAACGCCGCGCTCTGGCGCTCACCGGCTCCGGCGATCTGATCTGGGATTGGGACGTCGCCGCCGACAAGGTGTTCACCAGCCCGGAAACCGAAACGCTACTCGGCCTGAAGCGCGGCACGCTGGAAGACGCCGCCGCTGTCTGGCTCGAGGTGCTGCATCCGCTCGATCAGGACCGCTTCCGCGCCGCGCTCGACAGCGTGCTCGATCAACGACGCGGCCGCTTGGTGCAGGACTTCCGGCTGCGCACCGCGGACGGGCATTTCATGTGGTTCTCGCTGAAAGCCCGTCCCGTTGTCGGCTCCGACGGCGAAGTGTTGCGCGTAATCGGCACGCTCACCGACGTCACCGACAGCAAGAATGCCGAGGAGCGCCTGCTGCATGACTCGGTGAACGACAACCTCACCGGCCTGCCGAACCGCAAGCTGTTCCTCGATCGGCTCGCCAGCCTGAGCAACCTGTCGAAATCCGTGCCCGCGATGCGCCCGACCGTGATGGTGATCGACATCGACCGCTTCAAGCAGGTCAACGATTCCGTCGGCGTCGCGGTCGGCGATTCCATCTTGCTGACCTTGGCGCGACGACTGACGCGCATCCTGAAAGCCCAGGACACGCTGGCGCGCCTCGGCGGCGACCAGTTCGGCCTGATCCTGATGTCGGAGCAGGAATCGCCGCGTATCACCGCCTTCGCCGAAACCATCCGCAAGACCATCCGCGCGCCGATCGCCTTCAACGACCGCGAGATTTTCCTCACCGCCTCGATCGGCCTCTCGCTCAGCGATCCGCAGACCGCGCCGAACGATGAATTGGTGAAGGACGCAGAACTCGCGATGTATCACTCCAAGCGCATCGGCGGCGACCGCATCGACGTCTACAAACCGGCGATGCGCGCACGCAAGACCGACCGCCTGACGCTGGAATCCGAACTGCGCCGCGCCATCGAGCGCGAGGAAATCACCATCCTCTATCAGCCGATCGTGCGGCTCGAGGATCGCGCTATCGCCGGCTTCGAGGCCTTGGCGCGCTGGGATCACCCGAAGCTCGGCCGCATGTCGCCGATCGAATTTATCGGCATCGCCGAGCAAAGCGGCCTCATCATCGATCTCGGCATGTTCGTGATGGATCAGGCGGCCCGCCAGCTCAGCATATGGCAGCGCGCAACGCGCGCCTCTCGCGCCCCGATCTTCGTCAGCGTCAACGTCTCGTCGCGGCAGTTGCTGCGGCACGACCTGATCCACGACATCCGCACCGTGCTGTCACGCTCCTCGATCACGCGCGGCACGCTGAAGCTGGAATTGACCGAGTCGCTGGTGATGGAAAATCCGGAGCACGCAGCCCAGATGCTGCAACGGATTCGCGAACTCGGCGTCGGCCTGTCGCTCGACGATTTCGGTACCGGCCATTCGTCGCTGGCCTATCTGCAACGCTTCCCGTTCGACACCATCAAGATCGACCAGTCCTTCGTCCGCACCACCAGCCGCGGTACCCGCCCGGTGATCCTGAAATCGATTATCGCCTTGGCGCACGATCTCGGCATGGACGTGGTGGCGGAAGGCGCGGAAACCGATTCCGATGCGGTGGAGCTATATCAGCTCGGCTGCGAATACGCGCAGGGCTTCGCCTTCGGCGAGCCGATGGACACCGAAGCCGCAATGCGGCTGTTGACGGAAGAGCGGCTTGAGGCGGCGCATTGA
PROTEIN sequence
Length: 959
LRPIRFLALLALGLTLWVSMLPAYAVDAVSVRSDAAAIDLTAVLEHQHSDTDRIQVSTAPGTDGIVRRVEVRAREGGQNWVVFALANNTDDQLDRLIVAPHYRIVSSGLLWPDLGLSRIATITPSTGDRPERQENPTADVFRITLDPGAVITFVAELRTDKLPQLYLWEPDAYKDKVNSFTLYQGIVIGISGLLALVLTILFVVKGSIMFPAAAALAWAVLVYIGVDFGFWGKVLDMSAGAERIWRASGEAILAATLLVFLFAYLNLNRWHVRYSHITLGWLAFLGSLVALALFDPAVASGIARISLAMIAVFGFALIVYLSTHGYDRAVLLIPTWFLLVVWVIAAGMTVEGSVTNDIVGPALLGGLVLIVMLIGFTVMQHAFAGGAAGGIVSDVERRALALTGSGDLIWDWDVAADKVFTSPETETLLGLKRGTLEDAAAVWLEVLHPLDQDRFRAALDSVLDQRRGRLVQDFRLRTADGHFMWFSLKARPVVGSDGEVLRVIGTLTDVTDSKNAEERLLHDSVNDNLTGLPNRKLFLDRLASLSNLSKSVPAMRPTVMVIDIDRFKQVNDSVGVAVGDSILLTLARRLTRILKAQDTLARLGGDQFGLILMSEQESPRITAFAETIRKTIRAPIAFNDREIFLTASIGLSLSDPQTAPNDELVKDAELAMYHSKRIGGDRIDVYKPAMRARKTDRLTLESELRRAIEREEITILYQPIVRLEDRAIAGFEALARWDHPKLGRMSPIEFIGIAEQSGLIIDLGMFVMDQAARQLSIWQRATRASRAPIFVSVNVSSRQLLRHDLIHDIRTVLSRSSITRGTLKLELTESLVMENPEHAAQMLQRIRELGVGLSLDDFGTGHSSLAYLQRFPFDTIKIDQSFVRTTSRGTRPVILKSIIALAHDLGMDVVAEGAETDSDAVELYQLGCEYAQGFAFGEPMDTEAAMRLLTEERLEAAH*