ggKbase home page

SCN18_25_1_16_R1_B_scaffold_540_25

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(28010..29215)

Top 3 Functional Annotations

Value Algorithm Source
Sel1-like protein n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07HE5_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 64.9
  • Coverage: 393.0
  • Bit_score: 479
  • Evalue 2.90e-132
Beta-lactamase {ECO:0000313|EMBL:KIZ44009.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 65.5
  • Coverage: 386.0
  • Bit_score: 484
  • Evalue 1.20e-133
Sel1-like protein similarity KEGG
DB: KEGG
  • Identity: 64.9
  • Coverage: 393.0
  • Bit_score: 479
  • Evalue 8.10e-133

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1206
ATGCGGCAGCGGGACACTCTCTCACCGGGCGGAATTGACGCGGGCATGAGGATGCTGCGCGCCGTCACGATTCTGTTCGGTTCCGCGCTGGTCGCGGTCACCGCGCAGGCGCAGATCTCGCTGGTGCCGCCGGCCGCGATCCCGCAGCCGCACACCCAACCCGCGCCCGAGCCACCTCCCGCGCCGAAAGCCGCCCCCAGACACACGCCGAAGGCAGCGCCGAAACCCGCACCGAAACCGGAGGCCAAATCCGCCCCTGCGCCAGTGCGGAAACCGACCACCACGGAAAAGCCGGCGACCCCTGAGGCGGCGAAGGCGGCGGCCGCCGCCGCAGAGAGCAACGACCTCGATGCCGTGCTGAACGAGCCGCCGAACGTCGACCTGGTTTTCGGCGCCTATCAGCGCGGTTTCTACCGCACGGCATTCAACCTCGCGACGAAGCGCGCGCAGGAGAAGAACGACACCGCCGCGATGACCATGCTGGGCGAACTCTATGCGAACGGCCAAGGCGTCAAGCGCAACTATGCCAAGGCCATCGAATGGTACAAGCGCGCCGCCGACCAGGGCGATCGCGAGGCGATGTTCGCGCTGGCGATGCTGAAGATCGGCGGACAGGGCGGCCCGGCGGATCGCGAGGGCGGCGCGGGGCTATTGGCATCGGCGGCGAAACTCGGCGAGCCCAAGGCCGCCTACAATCTGGCGCTGCTCTATGTCGATGGCCAGACCTTCCCGCAGGACTTCAAGCGCGCCGCCGAACTGCTGCGGATCTCGGCCGATGCCGGCAACAACGACGCGCAATACGCGCTGGCGAGCTTTTACAAGGAAGGCACCGGCGTCCCGAAGGATATCGACAAGTCGGTCCGGCTGCTGCAAGCCGCCGCGATGGCCGGCAACATTCCCGCCGAAGTCGAATACGCCATCGCGCTGTTCAACGGCACCGGCACCACCAAGAACGAGGTCGCTGCGATCTCGTTGTTACGCAAAGCGGCGCGGCAGAACAACCCCATCGCCCAGAACCGGCTCGCGCTGGTGCTGACGCAAGGCAAGGGCGTGCCGGTCGACATGATCGAAGGCCTGAAATGGCATCTGGTGGCGAAAACCGCCGGCAAGGGCGATCCGCTGCTCGACGAGGCCTTGGCGCGGTTGTCGCCGGAAGATCAGGCCAAGGTCGAAGCTGCCGCCAGGAAATGGCTCGGCACCAAATGA
PROTEIN sequence
Length: 402
MRQRDTLSPGGIDAGMRMLRAVTILFGSALVAVTAQAQISLVPPAAIPQPHTQPAPEPPPAPKAAPRHTPKAAPKPAPKPEAKSAPAPVRKPTTTEKPATPEAAKAAAAAAESNDLDAVLNEPPNVDLVFGAYQRGFYRTAFNLATKRAQEKNDTAAMTMLGELYANGQGVKRNYAKAIEWYKRAADQGDREAMFALAMLKIGGQGGPADREGGAGLLASAAKLGEPKAAYNLALLYVDGQTFPQDFKRAAELLRISADAGNNDAQYALASFYKEGTGVPKDIDKSVRLLQAAAMAGNIPAEVEYAIALFNGTGTTKNEVAAISLLRKAARQNNPIAQNRLALVLTQGKGVPVDMIEGLKWHLVAKTAGKGDPLLDEALARLSPEDQAKVEAAARKWLGTK*