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SCN18_25_1_16_R1_B_scaffold_319_11

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 8223..11039

Top 3 Functional Annotations

Value Algorithm Source
LytTR family transcriptional regulator n=1 Tax=Afipia birgiae RepID=UPI000382C15C similarity UNIREF
DB: UNIREF100
  • Identity: 78.4
  • Coverage: 954.0
  • Bit_score: 1510
  • Evalue 0.0
LytTR family transcriptional regulator {ECO:0000313|EMBL:KIZ33858.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 81.3
  • Coverage: 939.0
  • Bit_score: 1548
  • Evalue 0.0
double-transmembrane region-like protein similarity KEGG
DB: KEGG
  • Identity: 78.8
  • Coverage: 938.0
  • Bit_score: 1505
  • Evalue 0.0

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2817
ATGATGGGGCTGCCGCTCGCCTTCGCTCAACCGCTGCTGCTCACCGGACTGCTGGCGCTACCGGTGCTGTGGTGGCTGCTGCGCGTGATGCCGCCACGCCCGAAGCGCGTCGATTTTCCGCCGACACGGCTGCTGCTCGAGATCGCGCCCAAGGAAGAAACGCCGTCGCGCACTCCGTGGTGGCTGACCGCGCTGCGTCTGCTCGCCGCCGCGCTGGTGATCTTTGCCGCCGCCGGCCCGACCTGGAATCCGCAGACCGGTGCAGCAAAGAGCAGCGGACCGCTGGTGATCCTGTTCGACGACGGCTGGAGCGCGGCGTCGAGTTGGGATGCCCGGATGAAAGCCGCCGACGAACTGATCGCGCGCGCCGACAGCGACCGGCGCGGCGTCGCGTTGATCCCGCTGTCAGAGCCCGCACGTGACATCACCTTGATGCCGGCCGGTACGGCGCGGGTGGCGATGCGGCAGTTGTCACCGAAGCCCTATTCCATCGCGCGTGTCGAAACGCTGCCGATCATCGCGCGCTTCCTGAAGGCGACCGGCGACTGCGACATCGTCTGGCTGTCGGACGGCATCGACACCGGGCGCGGCTCCGAATTCGTCGAAGGGCTCGGCAAGATCGTCGAGAACCGCACGCTGACCATCTTTAACGGCGGCGCGCCGCCGGCTCATGCGCTCGCCGCCGCGGAGAACGCTGCCGCCAAGATGACGGTGAAGGTATTGCGCGCCACATCTGGCGGTCTCGACGCAGGAATTGTCCGCGCACTGGACCAGAAGAATTCGCCGATCGGCGAAGCTCCATTCAAGTTCGGCGCGGCCGACACCGAAACCGAAGCGTCGTTCGACCTGCCGGTCGAACTGCGCAACGACATCGCGCGGCTCGAAGTCGCGGGCGAGCGTTCAGCCGGCGCGGTGCAACTGCTCGACAAACGCTGGCGGCGGCGCGCCGTCGGCCTCATCAGCGGTGCGTCGACCGATACCGCACAACCTCTGCTCGCTTCGACCTTCTATCTGACCCGCGCACTGGCGCCGTTCGCCGATGTGCGCGCGGCCGGCGGCGCGGCTCCGGCGCAGGCGGTGGCGCAATTCCTCGACCAGAAATTGCCGCTCATCGTGCTCGCCGATGTCGGTGCATTGCCGCCGGACCTGCGCGAGCGTCTCGATAAATGGATCGAACAAGGCGGCGTGCTGGTGCGCTTCGCCGGCCCGCGACTGGCGCAGGCCGATGACGATCTGGTGCCGGTCAAGCTGCGTCGCGGCGACCGCAGCCTCGGCGGCAGCCTGACATGGGAGAAGCCGCAGCATCTCTCCGCCTTTGCGTCGGATGGGCCGTTCGCGGGCCTCGCCGTGCCAGCCGACGTCACCGTGACGCGACAGGTGCTGGCCGAACCCGATGCGAAGCTGGCGACCCGAAGTTGGGCCACGCTGGTCGACGGCACGCCGCTCGTGACCGGCGAACGGCGCGGCAAAGGCATCATCACGCTGTTCCATGTCAGCGCCGACATGCGCTGGTCGGATCTGCCGATGTCCGGCACCTTCGTCGAGATGTTGCGCCGGCTGGTCGATCTCTCCGGTTATACGTCGACGCCGGGCGCGGGTCCCGCCGCCGAAGCCAAGGTGGAAACCGTTGCACCGCTACGCATCCTCGATGGCTTCGGCGCGTTCGGCCCGCCGCCCTCCACCGCCAAGCCGCTCGCGGCCACCTATCGCGACCGCGCGACGATCGATCATCCGCCCGGCTTCTACGGCCCGGCCGATGGACCGCTCGCGGTGAACACGCTGGCCGCCACCGACCGCCTCAAAGCGCTCGACGTCTCGAGCCTCAACGCACGGCACGCGACCTACACCAATGCCGAGCCCAGCGATCTGCGCGGCATGTTGCTCTCCGCCGCGCTGGCGCTGTTCCTGATCGATGCCGTCATCGTCGCCTTGCTCGGCGGCGGCCTCGCGGCGCTGTTGCGGCGGCGCACGGCGGTGGCGACGGCGTTGCTGCTCGCACTTGCGCTGAATTCAGCGGCGATCGTCCCAACACCGGCACACGCGCAAAATAGCGCCGATGACTTCGCGGTGAAAGCGGTGTCGCAAACCCGGCTTGCCTACGTCGTGACCGGCAATCCCGACGTCGATGACATCGTCAAATCCGGGATGCAGGCCCTGACGCTGTTTCTGTCGCAACGCACCGCGCTGGAGCCGGGCGAGCCGGTCGGCGTCGATCCGGCGCGCGACGAACTAGCGTTCTTTCCGCTGATCTACTGGGCCATCGTCCCCGGCGCGCCAAAGCCGTCGCAGGAAGCCCTCAACCGCATCGATGCCTACATGAAACAGGGCGGCACGGTGCTGTTCGACACCCGCGACGCCATCGAAGCGCCAAGCAGCCCCGGCGGAGAATCGCAGACGCCGGGGATGGTGACCTTGCGCGGCATCCTCTCGTCGCTCGATGTGCCCGAACTCGAGCCTGTTCCTCCCGAGCATGTGCTGACGAAGACGTTCTATTTGCTGCATGACTTCCCGGGCCGTTTCAATTCCGGGCAGACGTGGGTGGAAGCCCTGCCGCGAGATGAGAGCGACGACGCGGCGTCACGCCCGGCGCGCGGCGGCGACGGGGTGTCGCCGATCATCATCACCTCGAACGATCTCGCCGGCGCATGGGCGCTGCGGCCCGATGGTCGTCCGATGCTGCCGCTGACGCCGGGCGAACCGCGCCAGCGCGAGTTTGCCTTCCGCGCCGGCGTCAATGTCGTGATGTACACCCTGACCGGTAACTACAAGGCCGATCAGGTGCACGCGCCGGCACTGATCGAACGGCTGGGGCAATGA
PROTEIN sequence
Length: 939
MMGLPLAFAQPLLLTGLLALPVLWWLLRVMPPRPKRVDFPPTRLLLEIAPKEETPSRTPWWLTALRLLAAALVIFAAAGPTWNPQTGAAKSSGPLVILFDDGWSAASSWDARMKAADELIARADSDRRGVALIPLSEPARDITLMPAGTARVAMRQLSPKPYSIARVETLPIIARFLKATGDCDIVWLSDGIDTGRGSEFVEGLGKIVENRTLTIFNGGAPPAHALAAAENAAAKMTVKVLRATSGGLDAGIVRALDQKNSPIGEAPFKFGAADTETEASFDLPVELRNDIARLEVAGERSAGAVQLLDKRWRRRAVGLISGASTDTAQPLLASTFYLTRALAPFADVRAAGGAAPAQAVAQFLDQKLPLIVLADVGALPPDLRERLDKWIEQGGVLVRFAGPRLAQADDDLVPVKLRRGDRSLGGSLTWEKPQHLSAFASDGPFAGLAVPADVTVTRQVLAEPDAKLATRSWATLVDGTPLVTGERRGKGIITLFHVSADMRWSDLPMSGTFVEMLRRLVDLSGYTSTPGAGPAAEAKVETVAPLRILDGFGAFGPPPSTAKPLAATYRDRATIDHPPGFYGPADGPLAVNTLAATDRLKALDVSSLNARHATYTNAEPSDLRGMLLSAALALFLIDAVIVALLGGGLAALLRRRTAVATALLLALALNSAAIVPTPAHAQNSADDFAVKAVSQTRLAYVVTGNPDVDDIVKSGMQALTLFLSQRTALEPGEPVGVDPARDELAFFPLIYWAIVPGAPKPSQEALNRIDAYMKQGGTVLFDTRDAIEAPSSPGGESQTPGMVTLRGILSSLDVPELEPVPPEHVLTKTFYLLHDFPGRFNSGQTWVEALPRDESDDAASRPARGGDGVSPIIITSNDLAGAWALRPDGRPMLPLTPGEPRQREFAFRAGVNVVMYTLTGNYKADQVHAPALIERLGQ*