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SCN18_25_1_16_R1_B_scaffold_484_9

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(9725..11353)

Top 3 Functional Annotations

Value Algorithm Source
transcription elongation factor NusA n=1 Tax=Bradyrhizobium japonicum RepID=UPI000378C894 similarity UNIREF
DB: UNIREF100
  • Identity: 91.3
  • Coverage: 538.0
  • Bit_score: 952
  • Evalue 1.20e-274
Transcription termination/antitermination protein NusA {ECO:0000256|HAMAP-Rule:MF_00945}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. WSM471.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 538.0
  • Bit_score: 951
  • Evalue 3.70e-274
nusA; transcription elongation factor NusA similarity KEGG
DB: KEGG
  • Identity: 90.7
  • Coverage: 538.0
  • Bit_score: 948
  • Evalue 4.90e-274

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1629
ATGGCTGCCGTCAGCGCCAACCGGCTTGAACTCTTGCAGATCGCGGACGCGGTCGCGCGCGAAAAGTCGATCGACCGCAACATCGTCATCGAGGCGATGGAAGACGCCATCGCCAAAGCCGCGCGCGCCCGCTACGGCGCCGAGACCGACGTGCATGCCGAGATTCATCCCAAGACCGGGCAACTGTCGCTGACCCGCCACATGCTGGTGGTCGAGCAGGTCGAGAACGCCTCGAACCAGATTTCGCTGTTCGACGCGCAGCGCGCCAACCCCGGCGCGCAGATCGGCGACACCATCGCCGACACGCTGCCGCCGCTGGAATACGGCCGCATCGCCGCGCAGTCGGCCAAGCAGGTGATCGTGCAGAAGGTACGCGAGGCCGAGCGCGACCGTCAGTATCAGGAATTCAAGGACCGCATCGGCGACATCGTCAACGGCGTGGTGAAGCGTGTCGAATACGGCAGCGTCATTGTCGATCTGGGCCGTGGTGAAGCCATCATCCGCCGCGACGAGATGCTGCCGCGCGAAGTGTTCCGCAACGGCGATCGTGTCCGTGCTTTCGTGTTCGACGTCCGCCGCGAAACCCGCGGCCCGCAGATTTTCCTCTCGCGCACCCATCCGCAATTCATGGCAAAGCTGTTCGCGCAGGAAGTGCCGGAAATCTATGACGGCATCGTCGAAATCAAGGCGGTGGCCCGCGATCCCGGTTCGCGCGCGAAAATTGGCGTGATCTCGCGCGACTCGTCGGTCGATCCGGTCGGCGCCTGCGTCGGTATGCGCGGCTCGCGCGTGCAGGCGGTGGTGAACGAATTGCAGGGCGAGAAGATCGACATCATCCCGTGGTCGCCGGATATCGCGACCTTCGTGGTCAACGCCTTGGCGCCGGCGGAAGTCTCCAAGGTGGTCATCGACGAAGACCGCGAGCGCATCGAGGTTGTCGTTCCGGACACCAATAACCAACTATCGCTTGCGATCGGCCGTCGCGGCCAGAACGTGCGTCTCGCCTCGCAGCTCACCGGTTGGGACATCGACATTCTGACCGAGAGCGAGGAATCCGAGCGCCGCCAGGCCGACTTCGAGAATTCGACGCGGGTGTTCATGGAAGCCCTCAACGTCGATGAGGTGGTCGGGCAGTTGCTGGCGTCGGAAGGCTTTACCTCGGTCGAGGAATTGGCGCTGGTCGACGTCCGCGAACTCGCGAGCATCGAAGGCTTCGACGACGAGACCGCCGAGGAATTGCAGAGCCGCGCCCGCGAATATCTCGAAACGCTGGAAGCGGAGCTGGAGGCACGGCGCAAGGAGCTTGGCGTCGAGGACGCGCTGAAGGACGTGCCCGGCATTACCTCGAAGATGCTGGTCAAGCTCGGCGAGAACGACGTCAAGACCGTCGAGGATCTCGCCGGCTGCGCCACCGACGATCTGGTGGGCTGGACCGAGCGCAAGGACGGCGGCGAAGTAACCAAGTATCCCGGCTTCTTCGACGGCATCGAATTGTCGCGCGAGGACGCCGAACACCTGATCATGCAGGCGCGTCTCGCCGCCGGCTGGATCACCGAAGCCGACCTCGCCAAGGATGTTGACAAGGACGGCGGCGAGGAAGCCGACGCCACCGAAGACCAAGCGGTTTAA
PROTEIN sequence
Length: 543
MAAVSANRLELLQIADAVAREKSIDRNIVIEAMEDAIAKAARARYGAETDVHAEIHPKTGQLSLTRHMLVVEQVENASNQISLFDAQRANPGAQIGDTIADTLPPLEYGRIAAQSAKQVIVQKVREAERDRQYQEFKDRIGDIVNGVVKRVEYGSVIVDLGRGEAIIRRDEMLPREVFRNGDRVRAFVFDVRRETRGPQIFLSRTHPQFMAKLFAQEVPEIYDGIVEIKAVARDPGSRAKIGVISRDSSVDPVGACVGMRGSRVQAVVNELQGEKIDIIPWSPDIATFVVNALAPAEVSKVVIDEDRERIEVVVPDTNNQLSLAIGRRGQNVRLASQLTGWDIDILTESEESERRQADFENSTRVFMEALNVDEVVGQLLASEGFTSVEELALVDVRELASIEGFDDETAEELQSRAREYLETLEAELEARRKELGVEDALKDVPGITSKMLVKLGENDVKTVEDLAGCATDDLVGWTERKDGGEVTKYPGFFDGIELSREDAEHLIMQARLAAGWITEADLAKDVDKDGGEEADATEDQAV*