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SCN18_25_1_16_R1_B_scaffold_484_14

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(15193..15609)

Top 3 Functional Annotations

Value Algorithm Source
Transcriptional regulator, XRE family n=1 Tax=Rhodopseudomonas palustris (strain BisB18) RepID=Q21C38_RHOPB similarity UNIREF
DB: UNIREF100
  • Identity: 92.0
  • Coverage: 138.0
  • Bit_score: 248
  • Evalue 2.80e-63
Cro/Cl family transcriptional regulator {ECO:0000313|EMBL:KIZ39757.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 95.7
  • Coverage: 139.0
  • Bit_score: 254
  • Evalue 5.50e-65
XRE family transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 92.0
  • Coverage: 138.0
  • Bit_score: 248
  • Evalue 8.00e-64

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 417
ATGTCGACCAAAGCGCCCAATCCTGTTGACAAGTATGTCGGCAGTCGTGTGCGCATGCGCCGCATCATGCTGGGCATGAGCCAGGAGAAACTCGGCGAGGCACTCGGGCTGACGTTTCAGCAGGTTCAGAAGTACGAAAAGGGCACCAACCGCGTCGGTGCCAGCCGAATCCAGCAGATTTCTGAAATCCTTCAGGTGCCGGTGTCGTTCCTGTTCGAGGGCGGTCCGGGCGGCAACGTCAATGCCGAGGGTTTCAGCGAAGCACCCTCGCCCGCTTACGTGTCCGATTTTCTCGCGACGTCCGAAGGCCTGGCGCTGACTCGCGCCTTCACCCGTATCACCGATGCCAAACTCCGCCGCAGCATCGTCGATATGGTCGAGCAGATCGCTGCACGCGAACAACCTGACAATCGCTGA
PROTEIN sequence
Length: 139
MSTKAPNPVDKYVGSRVRMRRIMLGMSQEKLGEALGLTFQQVQKYEKGTNRVGASRIQQISEILQVPVSFLFEGGPGGNVNAEGFSEAPSPAYVSDFLATSEGLALTRAFTRITDAKLRRSIVDMVEQIAAREQPDNR*