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SCN18_25_1_16_R1_B_scaffold_643_11

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(11314..12348)

Top 3 Functional Annotations

Value Algorithm Source
Putative mRNA 3-end processing factor n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07TQ1_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 80.9
  • Coverage: 345.0
  • Bit_score: 580
  • Evalue 1.00e-162
metallo-hydrolase/oxidoreductase similarity KEGG
DB: KEGG
  • Identity: 80.5
  • Coverage: 348.0
  • Bit_score: 580
  • Evalue 2.90e-163
Putative mRNA 3-end processing factor {ECO:0000313|EMBL:ABJ04683.1}; TaxID=316055 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain BisA53).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 80.9
  • Coverage: 345.0
  • Bit_score: 580
  • Evalue 1.40e-162

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1035
ATGCGTCCGCAAGAGCTTCTCGGCCCAACAGCAGCCGGACTTCGTTGCAGGCCCGGCGATTTTTACGTCGATCCGGTGCGGCCGGTGGAGCGCGCCCTAATCACCCACGCTCACTCCGATCACGCCCGCCCCGGCCACGGCACGGTGCTGGCGACGCAGGAAACGCTCGACATGATGCGGCTGCGCTATGGCGACAATTTCGCCGGCCGCACGCAGGCTATCCGCTACGGCGAAACTCTTCAGCTCGACGACGTCAGCGTCAGCTTTCATCCGGCCGGGCATGTGCTGGGGTCGGCGCAGGTCGCAATGACCTGCAATGGCCTGCGCATCGTCGCCTCCGGCGACTACAAGGACGCGGCGGACCCAACCTGCACTCCATTCGAGGTGGTGTCGTGCGATGTCTTCATCACCGAGGCGACGTTCGGCCTGCCGGTGTTCCGGCATCCCGATGCCGCGCGTGAAGTGTGGAAACTGCTGGAGTCGGTGCGGCTGTTTCCGGAGCGCGCGCATCTGGTCGGCGCCTATTCGCTCGGCAAGGCGCAACGCGTCATCGCGCTGCTGCGCGCTGCGGGCCATGACGCGCCGATCTATCTGCACGGCGCGATGGAGCCGATCACTCGCTACTATGAAAGCCGCGGCATCGCACTCGGCGATCTGCGCCCGGTGAAAGACACGAAGAAGGCGGAGCTTACCGGCACCATCACCTTGGCACCGCCATCGGCCACTTCGGATCTATGGGCCCGGCGTTTCCCCGACCCGGTCACCGCCTTCGCCTCGGGCTGGATGCGGATTCGCGCCCGCGCGCGACAACGCGGTGTCGAACTGCCGCTGGTGATTTCCGATCACGCCGATTGGGACGGCCTCACCGCAACCGTCAAGGCCACCGGCGCCGGCGAAATCTGGGTCACGCACGGCGAGGAAGAGGCGCTGGTGCATTGGTGCAAGACGCAGGGGCTTGCCGCGCGGCCGTTGGCGCTGGTCGGCTACGGCGAGGAAGACGAAAACGCATCGGCTGCCGCCGAGGGCGCCGCATGA
PROTEIN sequence
Length: 345
MRPQELLGPTAAGLRCRPGDFYVDPVRPVERALITHAHSDHARPGHGTVLATQETLDMMRLRYGDNFAGRTQAIRYGETLQLDDVSVSFHPAGHVLGSAQVAMTCNGLRIVASGDYKDAADPTCTPFEVVSCDVFITEATFGLPVFRHPDAAREVWKLLESVRLFPERAHLVGAYSLGKAQRVIALLRAAGHDAPIYLHGAMEPITRYYESRGIALGDLRPVKDTKKAELTGTITLAPPSATSDLWARRFPDPVTAFASGWMRIRARARQRGVELPLVISDHADWDGLTATVKATGAGEIWVTHGEEEALVHWCKTQGLAARPLALVGYGEEDENASAAAEGAA*