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SCN18_25_1_16_R1_B_scaffold_665_29

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 21826..22122

Top 3 Functional Annotations

Value Algorithm Source
Conjugal transfer protein n=2 Tax=Oligotropha carboxidovorans RepID=B6JK42_OLICO similarity UNIREF
DB: UNIREF100
  • Identity: 98.0
  • Coverage: 98.0
  • Bit_score: 197
  • Evalue 4.10e-48
virB3; type IV secretion protein VirB3 similarity KEGG
DB: KEGG
  • Identity: 98.0
  • Coverage: 98.0
  • Bit_score: 197
  • Evalue 1.20e-48
Type IV secretion protein VirB3 {ECO:0000313|EMBL:AEI08316.1}; TaxID=504832 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Oligotropha.;" source="Oligotropha carboxidovorans (strain ATCC 49405 / DSM 1227 / OM5).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 98.0
  • Coverage: 98.0
  • Bit_score: 197
  • Evalue 5.70e-48

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Taxonomy

scnpilot_dereplicated_Plasmid_Rhizobiales_3 → scnpilot_dereplicated_Plasmid_Rhizobiales_3 → scnpilot_dereplicated_Plasmid_Rhizobiales_3 → scnpilot_dereplicated_Plasmid_Rhizobiales_3 → scnpilot_dereplicated_Plasmid_Rhizobiales_3 → Plasmid-like

Sequences

DNA sequence
Length: 297
ATGACAGAGAACGAGCTCGAGGACCCGCTGATCGCGCCCCTCGTCAAGGCGTTGACGCGCGCCCCGACGCTGATGGGCGTGCCGTACATGTACTTCATGTTCAACGGCGTGGTTTCGAGCGTGTGCTTTTTGATCTCGCACAATCTATTCCTGCTGTTGGTGGCGATCCCGCTGCACTTGTTTGGCTTCGTCATGACGCTGCGCGACGACCGCATTTTCGAAATCCTGTTCGTCAAATCCACCAAATGTCCGCCCCGCTCGCGCGCCTTCTGGGCCGCCGACAGCTACTCTGCGTGA
PROTEIN sequence
Length: 99
MTENELEDPLIAPLVKALTRAPTLMGVPYMYFMFNGVVSSVCFLISHNLFLLLVAIPLHLFGFVMTLRDDRIFEILFVKSTKCPPRSRAFWAADSYSA*