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SCN18_25_1_16_R1_B_scaffold_347_11

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 9445..10371

Top 3 Functional Annotations

Value Algorithm Source
Auxin Efflux Carrier n=1 Tax=Rhodopseudomonas palustris (strain BisA53) RepID=Q07L83_RHOP5 similarity UNIREF
DB: UNIREF100
  • Identity: 68.2
  • Coverage: 308.0
  • Bit_score: 422
  • Evalue 2.40e-115
Transporter {ECO:0000313|EMBL:KIZ36555.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 67.9
  • Coverage: 308.0
  • Bit_score: 424
  • Evalue 1.20e-115
auxin efflux carrier similarity KEGG
DB: KEGG
  • Identity: 68.2
  • Coverage: 308.0
  • Bit_score: 422
  • Evalue 6.90e-116

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGCTGACGGTGATCGCCTCGCTGATCCCGGTGTTCCTGCTGATCGTGCTCGGCTATGCGCTGCGCCGAACCTTGTTGAAAAAGGACGATCACTGGGTCGGGCTGGAGCAACTGGTCTACTACGTGCTGTTTCCGGCGCTGCTGATCGAGACGCTGGGCCGTGCCAACCTTGCGTCGGTGCCGATCGCCGGCGTCGGCGGCGCGATGCTGCTGTCGGTACTGACCATGGCGGCGCTATGTCTCGCGCTGCGCCCGCTGCTGGCGCGCACGCTGGCGTTGAGCGGGCCGTCCTTCACCTCGCTGTTTCAGGGCGCGGTGCGCTGGCAGACTTTCGTGGCGCTCTCCGTCGTCGGCAACATGCTGGGCGATCTCGGCCTCGCGGTGGCCTCGGTCGCGATGGTGGCGATGATCCCGGTCATCAACGTAATGAGCGTATCGGTGCTGGCGCACTTCGCCTCGCCGCAAAAGACCTCGTGGCGTGCGACGCTGCTGGCGATCGCGAAGAACCCGTTCATCTGGGGCTGCCTGATCGGCATCGCCATCAATGTCACCAAATTCCCGATCCCCAAGCCGCTCTACGAATTCGCCGGATCGCTCGGGCATTCGTCGCTGGCGATCGGCCTGCTGGTGGTCGGCGCCGGCCTGCAACTCGACAGCCTGAAGCGCCCCAATGCGGTGACGACGCTCACCGTCGTATTGAAACTGATCGGGATGCCGATCATCGCCATCACGCTCGGCTGGAGTTTCGGGCTGACGGGCTCGAACCTCACAGTCGTGGCCTGCTGCGCCTCGGTGCCGAGCGCATCCAACGCCTATATATTGGCACGGCAGATGGGCGGCGACGCGCCGCTGCTGGCGCAGATCCTGGTGCTGCAAACGGTGGTCGCGGCCTTCACCATGCCGCTATTCATTGCGCTCGCCGGATAA
PROTEIN sequence
Length: 309
MLTVIASLIPVFLLIVLGYALRRTLLKKDDHWVGLEQLVYYVLFPALLIETLGRANLASVPIAGVGGAMLLSVLTMAALCLALRPLLARTLALSGPSFTSLFQGAVRWQTFVALSVVGNMLGDLGLAVASVAMVAMIPVINVMSVSVLAHFASPQKTSWRATLLAIAKNPFIWGCLIGIAINVTKFPIPKPLYEFAGSLGHSSLAIGLLVVGAGLQLDSLKRPNAVTTLTVVLKLIGMPIIAITLGWSFGLTGSNLTVVACCASVPSASNAYILARQMGGDAPLLAQILVLQTVVAAFTMPLFIALAG*