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SCN18_25_1_16_R1_B_scaffold_347_23

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 22246..24624

Top 3 Functional Annotations

Value Algorithm Source
ribonuclease R (EC:3.1.13.1) similarity KEGG
DB: KEGG
  • Identity: 77.4
  • Coverage: 793.0
  • Bit_score: 1205
  • Evalue 0.0
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=323097 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Nitrobacter.;" source="Nitrobacter hamburgensis (strain X14 / DSM 10229).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.4
  • Coverage: 793.0
  • Bit_score: 1205
  • Evalue 0.0
Ribonuclease R n=1 Tax=Nitrobacter hamburgensis (strain X14 / DSM 10229) RepID=Q1QKL9_NITHX similarity UNIREF
DB: UNIREF100
  • Identity: 77.4
  • Coverage: 793.0
  • Bit_score: 1205
  • Evalue 0.0

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2379
TTGAGCAAGCCACGCGATAGCCGATTTCCTGACCGCGACGCGATCATCGCATTCGTGCGTGCGTCGAAAAGCGAAGTCGGCACCCGCGAGATCGCGCGCGCGTTCGGCTTGAAGAATGCCGACCGCGTTGAACTGAAGCAGATCTTGCGCACGCTCGCCGACGAAGGCGTGCTCGCCAAGCGCGGCCGCGAACTGCACGAAGCGGCCGCACTGCCGCCTACCCTGCTCGCCGACGTCACCGGCCGCGACAGCGACGGCGAGTTACTGGCGGCGCCGGCGGAATGGGACGTCGAGACGCAAGGTACCGCGCCGAAAATCCGCATACGCTTGCCGCGCTATCCCAAGCCCGGCACCGCCGCCGGCATCGGTGATCGCGCGCTGCTGCGCATCGAGCCCGACAGCAACGACGAAGCGCACGCTTACATTGGCCGCGTGATCAAGATCATCGACCACGCCAAATCGCGCGTGCTCGGCATCTTCCACGCCCTTCCCGGCGGCGGCGGACGGCTGGTGCCGGTCGACAAGAAGCAGGCCGGGCGCGAACTCAACATCGCCAAGGCCGATACCGGTGGTGCGGAAGATGGCGATCTCATCAGCGTCGATCTGGTCCGCTCGCGCGGCTTCGGCCTAGCATCGGGTCGCGTCAAGGAGCGGCTCGGTTCGCTGGCCACCGAGAAGGCCATCAGCCTGATCGCGATTCACGCCCACGATATTCCGCAGTCGTTTTCGCCCGCCGCCCTGAAGGAAGCCGAGGCGGCCGCGCCTGCGACGCTGCAAGGCCGCGAGGACTGGCGCGATATTCCGCTGGTCACCATCGATCCACCGGATGCGAAAGATCACGACGACGCCGTGCACGCGACGCCGGACGACGATCCCGCTAACAAGGGCGGCTATATCGTTCACGTCGCCATCGCTGACGTTGCGTTCTACGTGCGGCCGGGATCGGCGCTCGATCGCGACGCGCTGCTGCGCGGCAACTCGGTGTACTTCCCGGATCGCGTCGTGCCGATGCTGCCGGAGCGCATCTCCAACGACCTGTGTTCGCTGCGGCCGGGCGAAGCGCGTGGCGCGCTCGCCGTGCGGCTGGTGATCGCGCCGGATGGCCGCAAGCGTTCGCACACATTCCATCGCGTGCTGATGCGCTCGGCCGCGAAACTCAGTTACGCGCAAGTGCAGACCGCCATCGACGGCCATCCCGATGATGCCACCGGGCCTCTGCTCGAGCCGATCCTCAAGCCGCTCTACGCGGCTTACGCGCTGGTGAAGCGCGCGCGCGACGAGCGCGAGCCGCTCGAACTCGATTTGCCGGAACGCAAGATTGTCCTCAAACCCGACGGCACTGTGGACCGCGTGGTGACGCCGGAACGGCTCGATGCGCACAAGCTGATCGAAGAATTCATGATCCTCGCCAACGTCGCCGCCGCCGAGACGCTGGAGAAAAAAGGCCTGCCGCTGATCTATCGCGTCCACGACGAACCAACGGTGGAGAAGGTGCATAACCTTCAGGAATTCCTGAAGACGCTCGACATCTCTTTCGCCAAGAGCGGTGCGCTGCGGCCTTCGGTATTCAATCGCGTCCTGACCAAGATCAAGGGCCACGACTCCGAGCCGCTGGTCAACGAAGTGGTGCTCCGCTCACAGGCACAGGCGGAATATGCGGCCGAGAATTACGGTCACTTCGGCTTGAACCTGCGCCGCTACGCGCATTTCACCTCGCCGATCCGCCGCTATGCTGACTTGGTCGTGCATCGCGCCATCATCCGTGCGTTAGGGCTTGGTGCCGGCGCCCTGCCCGAAACCGAAACCATCGAGACGCTGAGTGAAGTCGCCGCGCAGATTTCCGCGACCGAACGCCGTGCGATGAAGGCGGAACGCGAAACCGTCGACCGGCTGATCGCGCATCATCTCGCCGACCGCATCGGCGCAGTGTTCCAGGGCCGCATTTCCGGCGTCACCCGCGCCGGCCTGTTCGTGAAACTCAGCGATACCGGCGCCGACGGCCTGATCCCGATCCGCACGCTTGGAACCGAGTATTTCAACTATGACGAAGCCCGCCACGCGCTGGTCGGCACACGCAGCGGTGCCATGCATCGGCTGGGTGACGTGGTCGAGGTTCGTCTGGTAGAAGCAGCTCCGGTGGCCGGTGCGCTGCGTTTCGAACTGTTGTCGGAGGGTCATACCGCTCCGCGCACGCGTCAACGACAGCGTGACAGCGACCGCTCGCACGAGGTGCGCCGGGCACGCGGCAAGGTCAAGGCCGGACGCGCGGCGAAAAAGCCACTGCGCAAACTTGCAAAAGGCCAATTTGCAAAAGGACCGGGGAAGTCTACCAAGAACAAGGCGAAATCCGGCAAAGGCAAGAACAAGGGCAAAACGTAA
PROTEIN sequence
Length: 793
LSKPRDSRFPDRDAIIAFVRASKSEVGTREIARAFGLKNADRVELKQILRTLADEGVLAKRGRELHEAAALPPTLLADVTGRDSDGELLAAPAEWDVETQGTAPKIRIRLPRYPKPGTAAGIGDRALLRIEPDSNDEAHAYIGRVIKIIDHAKSRVLGIFHALPGGGGRLVPVDKKQAGRELNIAKADTGGAEDGDLISVDLVRSRGFGLASGRVKERLGSLATEKAISLIAIHAHDIPQSFSPAALKEAEAAAPATLQGREDWRDIPLVTIDPPDAKDHDDAVHATPDDDPANKGGYIVHVAIADVAFYVRPGSALDRDALLRGNSVYFPDRVVPMLPERISNDLCSLRPGEARGALAVRLVIAPDGRKRSHTFHRVLMRSAAKLSYAQVQTAIDGHPDDATGPLLEPILKPLYAAYALVKRARDEREPLELDLPERKIVLKPDGTVDRVVTPERLDAHKLIEEFMILANVAAAETLEKKGLPLIYRVHDEPTVEKVHNLQEFLKTLDISFAKSGALRPSVFNRVLTKIKGHDSEPLVNEVVLRSQAQAEYAAENYGHFGLNLRRYAHFTSPIRRYADLVVHRAIIRALGLGAGALPETETIETLSEVAAQISATERRAMKAERETVDRLIAHHLADRIGAVFQGRISGVTRAGLFVKLSDTGADGLIPIRTLGTEYFNYDEARHALVGTRSGAMHRLGDVVEVRLVEAAPVAGALRFELLSEGHTAPRTRQRQRDSDRSHEVRRARGKVKAGRAAKKPLRKLAKGQFAKGPGKSTKNKAKSGKGKNKGKT*