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SCN18_25_1_16_R1_B_scaffold_390_15

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(13854..14780)

Top 3 Functional Annotations

Value Algorithm Source
Farnesyl-diphosphate synthase {ECO:0000313|EMBL:ABD05227.1}; EC=2.5.1.10 {ECO:0000313|EMBL:ABD05227.1};; TaxID=316058 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris (strain HaA2).;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.7
  • Coverage: 308.0
  • Bit_score: 524
  • Evalue 8.40e-146
geranylgeranyl pyrophosphate synthase n=1 Tax=Rhodopseudomonas sp. B29 RepID=UPI0003B46873 similarity UNIREF
DB: UNIREF100
  • Identity: 86.4
  • Coverage: 308.0
  • Bit_score: 528
  • Evalue 3.20e-147
polyprenyl synthetase similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 308.0
  • Bit_score: 524
  • Evalue 1.70e-146

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 927
ATGACCACCGCTACTTCATCGCAGGACTTCGCCAAGCGTCTGGACGCGACTGCGGCCGACACCGAGGCGCTGCTCGGCCAGTTGCTGTCCGACACCTTGCTGCCGGACGAGATCGCGCGGCCGCGCCGGGTGATGGAGGCGATGCGCTATTCGACGCTCGGCGGCGGCAAGCGCCTCCGGCCCTTTCTGGTCGTGGAAAGTTCCGCCGTGTTCGGCGTGCCGCGTGCCTCCGCATTGCTGGCCGGCGCCGCGCTGGAATGCATCCACTGCTATTCGCTGATTCACGACGACCTGCCGGCGATGGACAACAGCGAATTGCGGCGCGGCCGCCCGACGCTGCACAAGCAATATGACGACGCCACCGCCATCCTCGCAGGCGACGCGCTGCTGACGCTGGCGTTCGACATCATCAGCCGCGATGAGTTGCATAGCGACCCGACGGTCCGCCTGTTACTGACGCGGGCGCTGGCGCGCGCCTCCGGCATCGGCGGCATGGTCGGCGGGCAGATGCTCGACCTCGCCGGCGAAGGCCGCTTCGGCGATCGCGAGCCGGTCGACGTTGCGCGATTGCAGCAGATGAAGACCGGCGCGCTGCTTCGCTACGGCTGCATCGCCGGCGCCATCCTCGGACAAGCCTCACAAAAGGATTATCAGGCGCTCGACGATTACGGCCGCGCGCTCGGTGAGGCCTTCCAGATCGCCGACGACCTGCTCGACGTCGAAGGCGACGCTGCCGCGCTCGGCAAGCAGACCGGACAGGATGCAGCGTTAGGTAAAACCACGTTCGTGACCCAGCTCGGCGTCGAGGGCGCCAAGCAACGCGTGCGCGATCTGATCGCCAAGGCCGACAGCGCGCTGGCGCCGTTCGGCGCACGCGGCGATGTGCTTCGCGCCACCGCACGCTTCGTTGCCGAACGCAAGAACTAG
PROTEIN sequence
Length: 309
MTTATSSQDFAKRLDATAADTEALLGQLLSDTLLPDEIARPRRVMEAMRYSTLGGGKRLRPFLVVESSAVFGVPRASALLAGAALECIHCYSLIHDDLPAMDNSELRRGRPTLHKQYDDATAILAGDALLTLAFDIISRDELHSDPTVRLLLTRALARASGIGGMVGGQMLDLAGEGRFGDREPVDVARLQQMKTGALLRYGCIAGAILGQASQKDYQALDDYGRALGEAFQIADDLLDVEGDAAALGKQTGQDAALGKTTFVTQLGVEGAKQRVRDLIAKADSALAPFGARGDVLRATARFVAERKN*