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SCN18_25_1_16_R1_B_scaffold_390_30

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(27899..28978)

Top 3 Functional Annotations

Value Algorithm Source
Peptide chain release factor 1 n=1 Tax=Bradyrhizobium sp. STM 3843 RepID=H0TXG9_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 87.7
  • Coverage: 358.0
  • Bit_score: 614
  • Evalue 3.90e-173
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=551947 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. STM 3843.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.7
  • Coverage: 358.0
  • Bit_score: 614
  • Evalue 5.50e-173
prfA; peptide chain release factor 1 similarity KEGG
DB: KEGG
  • Identity: 86.3
  • Coverage: 358.0
  • Bit_score: 610
  • Evalue 2.70e-172

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1080
ATGCTGCCTGAAGCCAAACTCGACATCCTGCTGGCGCGCCACGCCGAACTCGAAGCCCGATTACTGGGCGATGTCGGCGCCGAGAATTACGTGCGGATGACGCGCGAACTGGCCGAACTCAATCCGGTGATCGACGCGGTGAAAGCCTATCGCGCGGCCGTCGCCGAACTTGCCGGCATCGACGCCTTGGTGAGCGATCCGACGACCGACGCCGAGATGCGCGAGCTGGCAGAAGCCGAGCGCCCGGAACTGGAAACGCGCCGCGACGAGCTGATGCAGCAGATTCGCATCGCGCTGTTGCCGAAGGACGCGATGGACGAACGCAACGTCATCCTCGAAATCCGCGCCGGCACCGGCGGCGACGAAGCCTCGCTGTTCGCCGGCGACCTGTTCCGGATGTACGAGCGCTTCGCTAGCTTGCAGGGTTGGAAGGTCGAAGTGATCTCCGCCAGCGAAGGCACCGTCGGCGGCTACAAGGAAATCATCGCCGAAGTGCAGGGCCGCGGCGTGTTCGCCAAACTAAAATTCGAATCCGGCGCGCACCGCGTGCAGCGCGTGCCTGACACCGAAACGCAAGGCCGCATCCACACCTCGGCGGCGACCGTCGCGGTGCTGCCGGAAGCTCAAGACGTCGACATCGACATCAAAAACGAGGACCTGCGCATCGAGACCATGCGCGCGCAGGGTGCCGGCGGCCAGCACGTCAACAAGACCGAATCGGCGATCCGCATCACGCACCTGCCGACCGGCATTGTGGTGATGATGCAGGACAGCCGCTCGCAACATAAGAACCGCGCCAGTGCCATGAACATCCTGCGCTCGCGGCTCTACGATGCCGAACGCCAGCGCCTCGATTCCGAACGCTCCGCCGACCGGCGCGGTCAGGTCGGCTCCGGGGATCGCTCCGAGCGCATCCGTACCTATAATTTCCCGCAGGGTCGCGTTACCGACCATCGCATCAACCTGACACTCTATAAGCTGCCGCAAGTGATCGCCGGCGAAGCGCTGGGCGAGCTGATCGACGCGCTGACCACCGAGCATCAGGCCGCGCAACTGGCGGCGCAGGGCGCGGCGGCTTGA
PROTEIN sequence
Length: 360
MLPEAKLDILLARHAELEARLLGDVGAENYVRMTRELAELNPVIDAVKAYRAAVAELAGIDALVSDPTTDAEMRELAEAERPELETRRDELMQQIRIALLPKDAMDERNVILEIRAGTGGDEASLFAGDLFRMYERFASLQGWKVEVISASEGTVGGYKEIIAEVQGRGVFAKLKFESGAHRVQRVPDTETQGRIHTSAATVAVLPEAQDVDIDIKNEDLRIETMRAQGAGGQHVNKTESAIRITHLPTGIVVMMQDSRSQHKNRASAMNILRSRLYDAERQRLDSERSADRRGQVGSGDRSERIRTYNFPQGRVTDHRINLTLYKLPQVIAGEALGELIDALTTEHQAAQLAAQGAAA*