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SCN18_25_1_16_R1_B_scaffold_409_16

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 18679..19368

Top 3 Functional Annotations

Value Algorithm Source
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; rRNA (uridine-2'-O-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547}; TaxID=883079 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Afipia.;" source="Afipia clevelandensis ATCC 49720.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 86.2
  • Coverage: 224.0
  • Bit_score: 393
  • Evalue 1.30e-106
Ribosomal RNA large subunit methyltransferase E n=2 Tax=Bradyrhizobiaceae RepID=F7QLV0_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 86.2
  • Coverage: 224.0
  • Bit_score: 393
  • Evalue 9.00e-107
ribosomal RNA methyltransferase RrmJ/FtsJ similarity KEGG
DB: KEGG
  • Identity: 83.4
  • Coverage: 229.0
  • Bit_score: 387
  • Evalue 1.80e-105

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 690
ATGGCAAAGGACACCACCGGGCGGCTGCACGTCACCGTCAAGAGCGCCGGCAAACGCAAGCTGTCGTCAAAGCTGTGGCTGGAGCGGCAGCTCAACGACCCCTATGTTGCGCAAGCGAAGCGTGACGGCTGGCGCTCGCGCGCCGCCTACAAGCTGATCGAGATGGACGACAAGTACCGGCTGTTAAAGCCGGGGCAGGTCGTGGTCGACCTCGGCGCCGCGCCCGGTGGCTGGAGCCAGGTCGCCGCGCGCAAGGTCGGTTCGCTCGAAGGCAAGGGCAAAGTAGTGGCGATTGACCTGCTCGAGATGCCGGAAATTCCCGGCGTCACCTTCACGCAGCTCGATTTCATGGACGACCGCGCACCGGACATGCTGCGCGAGATGATTGGTGGCGGCGCCGATGTCGTGATGTCGGACATGGCCGCCAACACGACGGGCCACCGCAAGACCGATCAGTTGCGCATCGTCGGCCTCGTGGAAACGGCCGCTGCGTTTGCCGCCGAAGTGTTGAAGCCGGGCGGCGCCTTCATTGCAAAAGTGTTCCAGAGCGGCGCGGACGCAGAACTGCTGGCGCAGGTGAAACGCGACTTCGCCACCGTGCGCCACGTCAAGCCGGCGGCGAGCCGTCAGGATTCGTCGGAGCGCTATCTGCTGGCGACAGGCTTTCGTGGCGGGCGGGAGCAGGATTAA
PROTEIN sequence
Length: 230
MAKDTTGRLHVTVKSAGKRKLSSKLWLERQLNDPYVAQAKRDGWRSRAAYKLIEMDDKYRLLKPGQVVVDLGAAPGGWSQVAARKVGSLEGKGKVVAIDLLEMPEIPGVTFTQLDFMDDRAPDMLREMIGGGADVVMSDMAANTTGHRKTDQLRIVGLVETAAAFAAEVLKPGGAFIAKVFQSGADAELLAQVKRDFATVRHVKPAASRQDSSERYLLATGFRGGREQD*