ggKbase home page

SCN18_25_1_16_R1_B_scaffold_409_27

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 29929..31209

Top 3 Functional Annotations

Value Algorithm Source
Phage integrase n=1 Tax=Hyphomicrobium denitrificans 1NES1 RepID=N0B0X0_9RHIZ similarity UNIREF
DB: UNIREF100
  • Identity: 91.1
  • Coverage: 426.0
  • Bit_score: 781
  • Evalue 2.90e-223
phage integrase similarity KEGG
DB: KEGG
  • Identity: 91.1
  • Coverage: 426.0
  • Bit_score: 781
  • Evalue 8.10e-224
Phage integrase {ECO:0000313|EMBL:AGK57104.1}; TaxID=670307 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Hyphomicrobiaceae; Hyphomicrobium.;" source="Hyphomicrobium denitrificans 1NES1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 91.1
  • Coverage: 426.0
  • Bit_score: 781
  • Evalue 4.00e-223

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1281
ATGTTGACCGATGCAGCCCTTAAGCATCTGAAACCAAAAGAGAAAATTTACAAGGTGACGGACCGGGACGGCATGTATGTGCTCGTGAAGCCCTCGGGGACCCTCACTTTTCGGCTGGACTACCGGATGAATGGGCGGCGCGAGACCGTCACGTTTGGCAAATACGGGCCGGCGGGGCTGTCGCTCGCTCGTGCGCGAGAGCTGTGCATCGACGCCAAGCGGGCGATCAGCGAGGGCCGATCGCCGGCGATCGAGAAGCAGCGGGAGAAGCGCCGGCTCCTGGAAGCCAAGAGCTTTGGCGAGTTCGGTGAGAAATGGTTGACCGCGGCGCCGATGGCGGACAGCACGCGGGCGATGCGCCGGTCGATCTTCGAGCGCGAACTGCTGCCCAAGTGGCGCACCAGGCTGCTGACGGAAATCACGCCAGACGATCTCCGGGCCCATTGCGGCGCCATCGTCGAGCGCGGCGCGCCGGCGACGGCGATCCACGTCCGCGACATCGTCAAGCAGATCTATGGCTTTGCGATCTTGCATGGCGAGAAAGTCGCCAACCCGGCTGACGATGTGGGACCGTCTTCTATCGCGACCTTCGTGCCGAAGGACCGGTCGCTCTCGCCGACCGAGATCAGGATCATGCTCAAGCTGCTCGAGAAGGTGGCGACGCTGCCGACCATCAGGCTCGGCATGCGCCTCTATCTGCAGACGATGGTGCGCAAGAGCGAGCTGCAGGACGCGACATGGGATGAAGTCGATTTTGAGAATGCCGTTTGGACTATCCCGAAAGAGCGGATGAAGCGCTCGAAAGCGCACAATGTCTATCTGTCGCGCCAGACCCTTGACATCATGATCGCGCTGAAGACCTGTGCCGGAAACTCAAAGTACCTCCTGCCGTCACGCTATGATGCCGATGCGCCCATGTCGCGGGCAACTTTCAATCGCGTCACATATGCGGTGGTTGAGCAGGCGAAGAAGGAAGGTCTGCCGCTGGAGCCTTTCACCGTTCACGACCTGCGGAGGACGGGCTCGACACTGCTCAACGAACTCGGGTTCAACAGCGACTGGATCGAGAAGTGCTTGGCACACGAGGACGGCCGTTCTTCGCGCGGCGTTTACAACAAGGCTGAATATGAAGTGCAGCGGCGCCACATGATGCAGGAGTGGTCCGACATCATCGATGCCTGGGCCGCTGGCAAGAAGCGCGTGCCCGTGGTCATCCCAGCTTCGATGCCGTTGCTTGAACCCGACCCGGCGATCGAACCGGGCGCGATCGCCGCTGCCTGA
PROTEIN sequence
Length: 427
MLTDAALKHLKPKEKIYKVTDRDGMYVLVKPSGTLTFRLDYRMNGRRETVTFGKYGPAGLSLARARELCIDAKRAISEGRSPAIEKQREKRRLLEAKSFGEFGEKWLTAAPMADSTRAMRRSIFERELLPKWRTRLLTEITPDDLRAHCGAIVERGAPATAIHVRDIVKQIYGFAILHGEKVANPADDVGPSSIATFVPKDRSLSPTEIRIMLKLLEKVATLPTIRLGMRLYLQTMVRKSELQDATWDEVDFENAVWTIPKERMKRSKAHNVYLSRQTLDIMIALKTCAGNSKYLLPSRYDADAPMSRATFNRVTYAVVEQAKKEGLPLEPFTVHDLRRTGSTLLNELGFNSDWIEKCLAHEDGRSSRGVYNKAEYEVQRRHMMQEWSDIIDAWAAGKKRVPVVIPASMPLLEPDPAIEPGAIAAA*