ggKbase home page

SCN18_25_1_16_R1_B_scaffold_488_6

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 3454..4248

Top 3 Functional Annotations

Value Algorithm Source
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215290};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 87.9
  • Coverage: 264.0
  • Bit_score: 493
  • Evalue 1.00e-136
thyA; thymidylate synthase (EC:2.1.1.45) similarity KEGG
DB: KEGG
  • Identity: 86.7
  • Coverage: 264.0
  • Bit_score: 492
  • Evalue 6.10e-137
Thymidylate synthase n=1 Tax=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) RepID=TYSY_BRASB similarity UNIREF
DB: UNIREF100
  • Identity: 86.7
  • Coverage: 264.0
  • Bit_score: 492
  • Evalue 2.10e-136

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 795
ATGCACCAGTATCACGACCTGCTCGAACGCATTCTCGCCGATGGCGTGGAAAAGCACGACCGCACCGGCACCGGCACGCTGTCGGTGTTCGGCCATCAGACGCGCCACAATTTGGCCGCAGGATTCCCGCTGCTCACGACGAAGAAGCTATCCCTCAAATCGATCATTCACGAACTGCTCTGGTTCCTGAAGGGCGACACCAACATCAAGTATCTGAAGGACCACGGCGTCTCGATCTGGGACGAGTGGGCAGATGAGAATGGCGACCTCGGTCCGGTCTATGGTTCTCAGTGGCGCTCATGGCCGGCGCCGGATGGACGCAGCATCGATCAGATCGCCAATGTCGTCGACATGATCCGACGCAATCCGGATTCGCGGCGGCTGATCGTCTCGGCATGGAATCCGGCCGAGGTCGACAAGATGGCATTGCCGCCGTGCCATTCCCTGTTTCAGTTCTATGTCGCGAACGGCAAGCTGTCCTGTCAACTCTATCAGCGCTCCGCCGATGTGTTTCTCGGCGTGCCGTTCAACATCGCATCCTATGCGTTGCTGACGATGATGGTCGCACAAGTCACTGGCTTGAAAGCAGGTGAATTCATTCACACGCTTGGCGACGCGCATCTCTATTCCAATCATCTGGAGCAGGCGCGCTTGCAATTGACGCGCGCGCCGCGCGCGTTGCCGACGATGACGCTCAATCCTGACGTGAAGGATATCTTCGCCTTCCGCTACGAGGATTTCACGCTGACGAATTACGATCCGCATCCGCACATCAAGGCCGAGGTCGCGGTGTGA
PROTEIN sequence
Length: 265
MHQYHDLLERILADGVEKHDRTGTGTLSVFGHQTRHNLAAGFPLLTTKKLSLKSIIHELLWFLKGDTNIKYLKDHGVSIWDEWADENGDLGPVYGSQWRSWPAPDGRSIDQIANVVDMIRRNPDSRRLIVSAWNPAEVDKMALPPCHSLFQFYVANGKLSCQLYQRSADVFLGVPFNIASYALLTMMVAQVTGLKAGEFIHTLGDAHLYSNHLEQARLQLTRAPRALPTMTLNPDVKDIFAFRYEDFTLTNYDPHPHIKAEVAV*