ggKbase home page

SCN18_25_1_16_R1_B_scaffold_488_18

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 15200..15811

Top 3 Functional Annotations

Value Algorithm Source
Lysine exporter protein (LYSE/YGGA) n=1 Tax=Rhodopseudomonas palustris (strain DX-1) RepID=E6VCX8_RHOPX similarity UNIREF
DB: UNIREF100
  • Identity: 67.8
  • Coverage: 199.0
  • Bit_score: 270
  • Evalue 1.30e-69
Lysine transporter LysE {ECO:0000313|EMBL:KIZ34512.1}; TaxID=1076 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Rhodopseudomonas.;" source="Rhodopseudomonas palustris.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 69.3
  • Coverage: 199.0
  • Bit_score: 278
  • Evalue 6.90e-72
lysine exporter protein LysE/YggA similarity KEGG
DB: KEGG
  • Identity: 67.8
  • Coverage: 199.0
  • Bit_score: 270
  • Evalue 3.80e-70

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 612
ATGGTTGCGATGTCCCAGCAATTGCTGTTGGCTTTCCTGGTGTTCGCCGTCGTGACGCTGTTCACGCCGGGGCCGAACAACGTCATGCTGTTGTCCTCCGGGCTGAATTTTGGCGTCCGCCGCACGCTGCCGCATGTGGCCGGGGTGACGATCGGCTTTGCGGTGATGGTTGCGGCGGCCGGTCTCGGCTTCGGCGCGGTCTTTGCCACCTATCCGGTGCTACAAACCGTTCTGAAGTACGCAGGCGCAGCCTATCTGGTGTACCTCGCGCTCGTGATCGGATTGTCCAAAGCGCCTGAGCCGGGCGATGCCGATCGACGCAAGCCGATGACGTTCCTCGGCGCGGCGGCCTTCCAGTGGGTCAACGTCAAGGGCTGGGTGATGATCATCGGTACTATCACGGCCTATGCGGCGATGGCGACCTATCCGTGGAACATTCTGACGCAGGCCGGGATATTTCTGTGTTTCGGCTTCCTGTCGTCGTTGACCTGGGCACTGTTCGGCAGATGGCTGCAACCGCTGGTGAAATCGCCGTGGGCGGTGCGGACGATTAACTGGTCAATGGCGGCGCTGCTGCTCGGCTCGCTCTATCCTGTGCTGGCGGAAGGCTGA
PROTEIN sequence
Length: 204
MVAMSQQLLLAFLVFAVVTLFTPGPNNVMLLSSGLNFGVRRTLPHVAGVTIGFAVMVAAAGLGFGAVFATYPVLQTVLKYAGAAYLVYLALVIGLSKAPEPGDADRRKPMTFLGAAAFQWVNVKGWVMIIGTITAYAAMATYPWNILTQAGIFLCFGFLSSLTWALFGRWLQPLVKSPWAVRTINWSMAALLLGSLYPVLAEG*