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SCN18_25_1_16_R1_B_scaffold_488_21

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: comp(17605..19167)

Top 3 Functional Annotations

Value Algorithm Source
Osmoprotectant transport system substrate-binding protein n=1 Tax=Bradyrhizobium sp. DFCI-1 RepID=U1IL24_9BRAD similarity UNIREF
DB: UNIREF100
  • Identity: 77.5
  • Coverage: 515.0
  • Bit_score: 797
  • Evalue 4.70e-228
Osmoprotectant transport system substrate-binding protein {ECO:0000313|EMBL:ERF83309.1}; TaxID=1230476 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp. DFCI-1.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 77.5
  • Coverage: 515.0
  • Bit_score: 797
  • Evalue 6.60e-228
glycine betaine ABC transporter substrate-binding protein/inner membrane protein similarity KEGG
DB: KEGG
  • Identity: 76.0
  • Coverage: 520.0
  • Bit_score: 792
  • Evalue 7.30e-227

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Taxonomy

SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → SCNPILOT_CONT_300_BF_Rhizobiales_62_47 → Rhizobiales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 1563
ATGAATCTGTGGTCCGATCCGCGCTGGACCGACGCGCTGGCGCATCTGCCGGATTATCTCGGCAATCATGTGCGCGTCAGCCTCGCCGCACTCGTGCTCGGCCTCCTGGTCAGCTTGCCGTTGGCCTTGCTGGCACGACATCGGCCAAGTCTGCGTGGCGCCCTGCTCGGCTTCGCCAGCACCGTGCAGACCGTGCCGGGTCTCGCGCTGCTGGCACTGTTCTATCCGCTATTGTTGGCGCTCGCGGCCCTGACGGCACAATGGTTCGGCTTCAGCTTTTCGGCGTTCGGCTTCCTGCCCGCGATGCTGGCGCTGGCGCTTTATTCGATGCTGCCGGTGCTGCGCAATACCATCACCGGACTGCAAGGGATCGATCTCGCCATCCTCGAGGCGGCGCAGGCCGTCGGCATGACGCCGCGGCAATCGTTGCGGATGGTCGAACTGCCGCTGGCGCTGCCAGTGATCATGGCAGGCATCCGCACTGCTGCGGTGTGGGTGATCGGCACCGCAACGCTGTCGACGCCGATCGGCCAGACCAGCCTCGGCAACTACATCTTCGCCGGCTTGCAGACGCAGAATTGGGTGTTCGTGCTGTTCGGTTGCGCGGCATCGGCGGTGCTGGCACTGATTGTCGATCAGATACTGGCGCTGATCGAGACCGGCGCGCGGCGCCGGAGCCGAATTCGTACGACGATGGGCGTAATCGGCGTGGTGCTGCTGATCGCGGCGGCGTTGATGCCGTCGCTGTCGCGTGCCCGGCAGAGCTATGTCGTCGGCGCAAAGACCTTCACCGAGCAATACATTCTCGCAGCTTTGTTGACGCAACGGTTGCAAGCGGCAGGGCTGCCGGCAACGACCCGCGAGGGCCTCGGCTCCAGCGTCATTTTCAATGCGCTCGAAAGCGGCGATATCGACGCCTACGTCGATTACTCCGGGACGCTGTGGGCGAACCAGATGCACCGCACGGACATCAAACCGCGCGATGAAGTGCTGGGCGATCTGAAAGCCGCGCTTGGAAAACAGCACGTCACCCTACTCGGCGAACTCGGCTTCGAGAATGCCTACGCACTGGTGATGCCGCGCGCACGGGCCGAAGCGCTCGGCATCCATTCCATCGCCGATCTCGCCGCCCATGCCGGTGAGATGTCGGTCGCAGGCGACTATGAGATTTTCTCGCGCCCGGAATGGGCCAGCCTTCGCAAAGCCTACAGCCTCACCTTTCGGCAGCAGCGCCAGATGCAGCCGGACTTCATGTATGCCGCCGTCGCCGCCGGCGAGGTGGATGTGATCGCCGGCTACACCAGCGACGGGCTGATCGCGAAATACGATCTCGTGGTGCTGAACGATCCGAAGCACGCCGTTCCACCGTATGATGCAATCGTGCTGCTCGCGCCGAAACGCGAAAACGACTCTGCGCTGCGCGATGCACTTGCACCACTACTCGGCAAGATCGATATCGCAACGATGCGTGAGGCCAATCTGCGCGCCAGCGGCAGCCAGTCGGCAGCCGATGTTGCAAGGTGGCTGTGGGAGGAGATCAGGGCAAAAGAAACTGCACACTAG
PROTEIN sequence
Length: 521
MNLWSDPRWTDALAHLPDYLGNHVRVSLAALVLGLLVSLPLALLARHRPSLRGALLGFASTVQTVPGLALLALFYPLLLALAALTAQWFGFSFSAFGFLPAMLALALYSMLPVLRNTITGLQGIDLAILEAAQAVGMTPRQSLRMVELPLALPVIMAGIRTAAVWVIGTATLSTPIGQTSLGNYIFAGLQTQNWVFVLFGCAASAVLALIVDQILALIETGARRRSRIRTTMGVIGVVLLIAAALMPSLSRARQSYVVGAKTFTEQYILAALLTQRLQAAGLPATTREGLGSSVIFNALESGDIDAYVDYSGTLWANQMHRTDIKPRDEVLGDLKAALGKQHVTLLGELGFENAYALVMPRARAEALGIHSIADLAAHAGEMSVAGDYEIFSRPEWASLRKAYSLTFRQQRQMQPDFMYAAVAAGEVDVIAGYTSDGLIAKYDLVVLNDPKHAVPPYDAIVLLAPKRENDSALRDALAPLLGKIDIATMREANLRASGSQSAADVARWLWEEIRAKETAH*