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SCN18_25_1_16_R1_B_scaffold_927_16

Organism: SCN18_25_1_16_R1_B_SCNPILOT_CONT_300_BF_Rhizobiales_62_47_62_13

near complete RP 50 / 55 MC: 4 BSCG 51 / 51 MC: 1 ASCG 12 / 38 MC: 3
Location: 12101..12667

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding protein n=1 Tax=Rhizobium mongolense RepID=UPI0003B474DF similarity UNIREF
DB: UNIREF100
  • Identity: 61.8
  • Coverage: 186.0
  • Bit_score: 239
  • Evalue 1.80e-60
DNA-binding protein {ECO:0000313|EMBL:ESX60183.1}; TaxID=1287292 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Phyllobacteriaceae; Mesorhizobium.;" source="Mesorhizobium sp. LSHC420B00.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 59.9
  • Coverage: 187.0
  • Bit_score: 236
  • Evalue 2.10e-59
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 58.5
  • Coverage: 188.0
  • Bit_score: 230
  • Evalue 3.10e-58

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Taxonomy

SCNPILOT_EXPT_300_BF_Sphingomonadales_67_9 → Sphingomonas → Sphingomonadales → Alphaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 567
TTGAGTGACTTCAAGTTTGACGCCGCGCTGCGTTGGGGAAGATTTGGTTCCAATAGGGCATTGCGTCGTCGCAAAGATGATGAATTGCCATTTCTCGATGATGACGCCTTTGCAGGTCGAGATTTGTTGCTCGACACGTGTGTCTACATTGATCTTATGCAAAATCGCGCGCCAACTGTCATCGACGATCTGATGGATGTGCGGCCAACGAATCATTCGACGGTTGCAATCCAGGAATTGATGCATTTGGCTGGTGTACTCGACCCAGATCACCAAGACACGAGAGCGGTTCTTGCACAGGTCGGTACCGCAATTGAGGGAATGAGGCCACATCGAATCCTTTTGCCAGATACCAACCTGCTCGGACGCGCAGCTCTGTTGTCGGGTATCGTTTGCCGTATACAAGGATTTCAAAAAGACGATCGGCGCCGTTGTCTTCAGGATTGTATTTTATTTCTTCAGGCTAAGAAGCATGGCCTTATGCTTTTAACGGGAAACATTCGAGATTTTGATATCTTATTACAGTTGCTTCCTGATGTCGGCGTTCTATTCTATCGGCGACGATGA
PROTEIN sequence
Length: 189
LSDFKFDAALRWGRFGSNRALRRRKDDELPFLDDDAFAGRDLLLDTCVYIDLMQNRAPTVIDDLMDVRPTNHSTVAIQELMHLAGVLDPDHQDTRAVLAQVGTAIEGMRPHRILLPDTNLLGRAALLSGIVCRIQGFQKDDRRRCLQDCILFLQAKKHGLMLLTGNIRDFDILLQLLPDVGVLFYRRR*